Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Vps39Q8R5L3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Gm13186-201ENSMUST00000118031 316 ntBASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Actl10-202ENSMUST00000226583 1501 ntBASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps39Q8R5L3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Gm13474-201ENSMUST00000122466 815 ntBASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.48■□□□□ 0.23
Vps39Q8R5L3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Gm11539-201ENSMUST00000119837 557 ntBASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Gm2274-201ENSMUST00000184539 609 ntBASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Gm30025-201ENSMUST00000218555 728 ntBASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps39Q8R5L3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms