Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh1Q8CGV4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh1Q8CGV4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh1Q8CGV4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh1Q8CGV4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh1Q8CGV4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Rdh1Q8CGV4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh1Q8CGV4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh1Q8CGV4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rdh1Q8CGV4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rdh1Q8CGV4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rdh1Q8CGV4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Gm27459-201ENSMUST00000184860 107 ntBASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Gm43347-201ENSMUST00000200226 580 ntBASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh1Q8CGV4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Gm12644-201ENSMUST00000119935 606 ntBASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.94■□□□□ 0.14
Rdh1Q8CGV4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Gm15165-201ENSMUST00000118140 502 ntBASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Gm27867-201ENSMUST00000184778 125 ntBASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Gm44454-201ENSMUST00000198541 138 ntBASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rdh1Q8CGV4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms