Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc5Q8CG46 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc5Q8CG46 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc5Q8CG46 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc5Q8CG46 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc5Q8CG46 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc5Q8CG46 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc5Q8CG46 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc5Q8CG46 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc5Q8CG46 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc5Q8CG46 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc5Q8CG46 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.38■□□□□ 0.85
Smc5Q8CG46 Prob1-201ENSMUST00000097619 3021 ntBASIC20.38■□□□□ 0.85
Smc5Q8CG46 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc5Q8CG46 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc5Q8CG46 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc5Q8CG46 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc5Q8CG46 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc5Q8CG46 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Gm11539-201ENSMUST00000119837 557 ntBASIC20.37■□□□□ 0.85
Smc5Q8CG46 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Smc5Q8CG46 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Gm7370-201ENSMUST00000219471 767 ntBASIC20.36■□□□□ 0.85
Smc5Q8CG46 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.36■□□□□ 0.85
Smc5Q8CG46 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc5Q8CG46 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc5Q8CG46 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.35■□□□□ 0.85
Smc5Q8CG46 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc5Q8CG46 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc5Q8CG46 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc5Q8CG46 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc5Q8CG46 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc5Q8CG46 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc5Q8CG46 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc5Q8CG46 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.34■□□□□ 0.85
Smc5Q8CG46 Gm36967-201ENSMUST00000193814 266 ntBASIC20.34■□□□□ 0.85
Smc5Q8CG46 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc5Q8CG46 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc5Q8CG46 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc5Q8CG46 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Smc5Q8CG46 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Smc5Q8CG46 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc5Q8CG46 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc5Q8CG46 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc5Q8CG46 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc5Q8CG46 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Smc5Q8CG46 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc5Q8CG46 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc5Q8CG46 Mir5122-201ENSMUST00000175004 89 ntBASIC20.33■□□□□ 0.85
Smc5Q8CG46 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms