Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc28bQ8CEG5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc28bQ8CEG5 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc28bQ8CEG5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc28bQ8CEG5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc28bQ8CEG5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ccdc28bQ8CEG5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc28bQ8CEG5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.31■□□□□ 0.2
Ccdc28bQ8CEG5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc28bQ8CEG5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Gm42545-201ENSMUST00000202755 922 ntBASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc28bQ8CEG5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Gm13158-201ENSMUST00000122007 736 ntBASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Ccdc28bQ8CEG5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Gm10517-202ENSMUST00000192970 758 ntBASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28bQ8CEG5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Gm12896-201ENSMUST00000118430 226 ntBASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Gm37292-201ENSMUST00000192062 758 ntBASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28bQ8CEG5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28bQ8CEG5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28bQ8CEG5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28bQ8CEG5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28bQ8CEG5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28bQ8CEG5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28bQ8CEG5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28bQ8CEG5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28bQ8CEG5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28bQ8CEG5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc28bQ8CEG5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28bQ8CEG5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms