Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zfp248Q640N4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zfp248Q640N4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Zfp248Q640N4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zfp248Q640N4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.54□□□□□ -0.4
Zfp248Q640N4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.54□□□□□ -0.4
Zfp248Q640N4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zfp248Q640N4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Zfp248Q640N4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Zfp248Q640N4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Zfp248Q640N4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zfp248Q640N4 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.54□□□□□ -0.4
Zfp248Q640N4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zfp248Q640N4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Zfp248Q640N4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zfp248Q640N4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.53□□□□□ -0.4
Zfp248Q640N4 Gm21814-202ENSMUST00000203277 873 ntBASIC12.53□□□□□ -0.4
Zfp248Q640N4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.53□□□□□ -0.4
Zfp248Q640N4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zfp248Q640N4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.53□□□□□ -0.4
Zfp248Q640N4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zfp248Q640N4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zfp248Q640N4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Zfp248Q640N4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zfp248Q640N4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zfp248Q640N4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zfp248Q640N4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zfp248Q640N4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zfp248Q640N4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Zfp248Q640N4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zfp248Q640N4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Zfp248Q640N4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Mir5122-201ENSMUST00000175004 89 ntBASIC12.52□□□□□ -0.41
Zfp248Q640N4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.52□□□□□ -0.41
Zfp248Q640N4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.52□□□□□ -0.41
Zfp248Q640N4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
Zfp248Q640N4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Zfp248Q640N4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.51□□□□□ -0.41
Zfp248Q640N4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zfp248Q640N4 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms