Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim38Q5SZ99 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.06■□□□□ 0.32
Trim38Q5SZ99 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Gm18421-201ENSMUST00000204122 625 ntBASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Gm10566-201ENSMUST00000086739 996 ntBASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim38Q5SZ99 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.05■□□□□ 0.32
Trim38Q5SZ99 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Gm11336-201ENSMUST00000118168 334 ntBASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Gm26039-201ENSMUST00000158152 144 ntBASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Gm10252-201ENSMUST00000209541 832 ntBASIC17.05■□□□□ 0.32
Trim38Q5SZ99 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.05■□□□□ 0.32
Trim38Q5SZ99 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim38Q5SZ99 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Gm15565-201ENSMUST00000118890 427 ntBASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms