Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.79□□□□□ -0.52
Rpl39P62892 Gm5408-201ENSMUST00000197998 747 ntBASIC11.79□□□□□ -0.52
Rpl39P62892 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rpl39P62892 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rpl39P62892 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.79□□□□□ -0.52
Rpl39P62892 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.79□□□□□ -0.52
Rpl39P62892 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rpl39P62892 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.79□□□□□ -0.52
Rpl39P62892 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.79□□□□□ -0.52
Rpl39P62892 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpl39P62892 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rpl39P62892 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Rpl39P62892 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.78□□□□□ -0.52
Rpl39P62892 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.78□□□□□ -0.52
Rpl39P62892 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.78□□□□□ -0.52
Rpl39P62892 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rpl39P62892 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.78□□□□□ -0.52
Rpl39P62892 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Rpl39P62892 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.78□□□□□ -0.52
Rpl39P62892 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Prob1-201ENSMUST00000097619 3021 ntBASIC11.78□□□□□ -0.52
Rpl39P62892 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rpl39P62892 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rpl39P62892 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Rpl39P62892 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rpl39P62892 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.77□□□□□ -0.52
Rpl39P62892 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rpl39P62892 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rpl39P62892 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.77□□□□□ -0.53
Rpl39P62892 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.77□□□□□ -0.53
Rpl39P62892 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.77□□□□□ -0.53
Rpl39P62892 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl39P62892 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.76□□□□□ -0.53
Rpl39P62892 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.76□□□□□ -0.53
Rpl39P62892 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.76□□□□□ -0.53
Rpl39P62892 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Rpl39P62892 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Gm4968-201ENSMUST00000071458 858 ntBASIC11.76□□□□□ -0.53
Rpl39P62892 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms