Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Sssca1P56873 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Sssca1P56873 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sssca1P56873 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.34□□□□□ -0.27
Sssca1P56873 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sssca1P56873 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.34□□□□□ -0.27
Sssca1P56873 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sssca1P56873 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.34□□□□□ -0.27
Sssca1P56873 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sssca1P56873 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.33□□□□□ -0.27
Sssca1P56873 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.33□□□□□ -0.28
Sssca1P56873 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sssca1P56873 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.33□□□□□ -0.28
Sssca1P56873 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.33□□□□□ -0.28
Sssca1P56873 Gm27000-201ENSMUST00000182943 842 ntBASIC13.33□□□□□ -0.28
Sssca1P56873 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.33□□□□□ -0.28
Sssca1P56873 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sssca1P56873 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.33□□□□□ -0.28
Sssca1P56873 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sssca1P56873 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Sssca1P56873 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sssca1P56873 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sssca1P56873 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sssca1P56873 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Sssca1P56873 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sssca1P56873 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sssca1P56873 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Sssca1P56873 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sssca1P56873 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Sssca1P56873 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sssca1P56873 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sssca1P56873 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.32□□□□□ -0.28
Sssca1P56873 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.32□□□□□ -0.28
Sssca1P56873 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.32□□□□□ -0.28
Sssca1P56873 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sssca1P56873 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sssca1P56873 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.32□□□□□ -0.28
Sssca1P56873 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
Sssca1P56873 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sssca1P56873 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Sssca1P56873 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sssca1P56873 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sssca1P56873 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms