Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Sox1P53783 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sox1P53783 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.79■□□□□ 0.28
Sox1P53783 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox1P53783 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox1P53783 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox1P53783 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox1P53783 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox1P53783 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Sox1P53783 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.78■□□□□ 0.28
Sox1P53783 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sox1P53783 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.78■□□□□ 0.28
Sox1P53783 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sox1P53783 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.78■□□□□ 0.28
Sox1P53783 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.78■□□□□ 0.28
Sox1P53783 Gm13823-201ENSMUST00000119930 345 ntBASIC16.78■□□□□ 0.28
Sox1P53783 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.78■□□□□ 0.28
Sox1P53783 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.78■□□□□ 0.28
Sox1P53783 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sox1P53783 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.78■□□□□ 0.28
Sox1P53783 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.78■□□□□ 0.28
Sox1P53783 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox1P53783 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sox1P53783 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.78■□□□□ 0.28
Sox1P53783 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.78■□□□□ 0.28
Sox1P53783 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox1P53783 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Sox1P53783 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sox1P53783 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox1P53783 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox1P53783 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.77■□□□□ 0.28
Sox1P53783 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox1P53783 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sox1P53783 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sox1P53783 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox1P53783 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sox1P53783 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox1P53783 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox1P53783 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox1P53783 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox1P53783 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox1P53783 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox1P53783 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.77■□□□□ 0.27
Sox1P53783 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sox1P53783 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sox1P53783 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox1P53783 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox1P53783 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.76■□□□□ 0.27
Sox1P53783 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox1P53783 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox1P53783 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.76■□□□□ 0.27
Sox1P53783 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Sox1P53783 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox1P53783 Gm13365-201ENSMUST00000121188 973 ntBASIC16.76■□□□□ 0.27
Sox1P53783 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox1P53783 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox1P53783 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.76■□□□□ 0.27
Sox1P53783 Gm27437-201ENSMUST00000183429 107 ntBASIC16.76■□□□□ 0.27
Sox1P53783 Gm17968-201ENSMUST00000194902 784 ntBASIC16.76■□□□□ 0.27
Sox1P53783 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox1P53783 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox1P53783 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sox1P53783 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox1P53783 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox1P53783 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox1P53783 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox1P53783 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Sox1P53783 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sox1P53783 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.75■□□□□ 0.27
Sox1P53783 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.75■□□□□ 0.27
Sox1P53783 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sox1P53783 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sox1P53783 Gm5682-201ENSMUST00000173402 505 ntBASIC16.75■□□□□ 0.27
Sox1P53783 Gm27300-201ENSMUST00000184085 97 ntBASIC16.75■□□□□ 0.27
Sox1P53783 Gm27335-201ENSMUST00000184758 97 ntBASIC16.75■□□□□ 0.27
Sox1P53783 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms