Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-1P50220 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Gm2559-201ENSMUST00000201323 363 ntBASIC13.69□□□□□ -0.22
Nkx2-1P50220 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-1P50220 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.68□□□□□ -0.22
Nkx2-1P50220 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.68□□□□□ -0.22
Nkx2-1P50220 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-1P50220 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.67□□□□□ -0.22
Nkx2-1P50220 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Gm15375-201ENSMUST00000119510 849 ntBASIC13.67□□□□□ -0.22
Nkx2-1P50220 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Gm4968-201ENSMUST00000071458 858 ntBASIC13.67□□□□□ -0.22
Nkx2-1P50220 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-1P50220 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms