Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp9P49962 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp9P49962 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp9P49962 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp9P49962 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp9P49962 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp9P49962 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Srp9P49962 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Srp9P49962 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Srp9P49962 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Srp9P49962 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Srp9P49962 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.03□□□□□ -0.16
Srp9P49962 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.03□□□□□ -0.16
Srp9P49962 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Srp9P49962 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Srp9P49962 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Srp9P49962 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Srp9P49962 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.02□□□□□ -0.17
Srp9P49962 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp9P49962 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp9P49962 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp9P49962 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Srp9P49962 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Srp9P49962 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Srp9P49962 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Srp9P49962 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.02□□□□□ -0.17
Srp9P49962 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Srp9P49962 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Srp9P49962 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Srp9P49962 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Srp9P49962 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.01□□□□□ -0.17
Srp9P49962 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Srp9P49962 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Srp9P49962 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 AC154649.1-201ENSMUST00000227392 384 ntBASIC14□□□□□ -0.17
Srp9P49962 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Srp9P49962 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Srp9P49962 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Srp9P49962 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms