Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Gm12918-201ENSMUST00000120234 636 ntBASIC15.33■□□□□ 0.04
BgnP28653 Gm15710-201ENSMUST00000121821 636 ntBASIC15.33■□□□□ 0.04
BgnP28653 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Gm5075-201ENSMUST00000196916 622 ntBASIC15.33■□□□□ 0.04
BgnP28653 AV356131-201ENSMUST00000206201 750 ntBASIC15.33■□□□□ 0.04
BgnP28653 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.33■□□□□ 0.04
BgnP28653 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.33■□□□□ 0.04
BgnP28653 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BgnP28653 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
BgnP28653 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.32■□□□□ 0.04
BgnP28653 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.32■□□□□ 0.04
BgnP28653 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Gm42642-201ENSMUST00000200683 355 ntBASIC15.32■□□□□ 0.04
BgnP28653 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.32■□□□□ 0.04
BgnP28653 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
BgnP28653 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BgnP28653 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
BgnP28653 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BgnP28653 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.31■□□□□ 0.04
BgnP28653 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.31■□□□□ 0.04
BgnP28653 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.31■□□□□ 0.04
BgnP28653 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.31■□□□□ 0.04
BgnP28653 Gm10138-203ENSMUST00000206952 366 ntBASIC15.31■□□□□ 0.04
BgnP28653 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.31■□□□□ 0.04
BgnP28653 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.31■□□□□ 0.04
BgnP28653 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.31■□□□□ 0.04
BgnP28653 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.31■□□□□ 0.04
BgnP28653 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.31■□□□□ 0.04
BgnP28653 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BgnP28653 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
BgnP28653 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
BgnP28653 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
BgnP28653 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
BgnP28653 Gm15375-201ENSMUST00000119510 849 ntBASIC15.3■□□□□ 0.04
BgnP28653 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.3■□□□□ 0.04
BgnP28653 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.3■□□□□ 0.04
BgnP28653 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
BgnP28653 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.3■□□□□ 0.04
BgnP28653 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
BgnP28653 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.3■□□□□ 0.04
BgnP28653 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
BgnP28653 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
BgnP28653 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
BgnP28653 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
BgnP28653 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
BgnP28653 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
BgnP28653 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms