Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx1P18111 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdx1P18111 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdx1P18111 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.31□□□□□ -0.28
Cdx1P18111 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdx1P18111 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cdx1P18111 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdx1P18111 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdx1P18111 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdx1P18111 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.31□□□□□ -0.28
Cdx1P18111 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cdx1P18111 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdx1P18111 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdx1P18111 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Cdx1P18111 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Cdx1P18111 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx1P18111 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdx1P18111 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdx1P18111 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdx1P18111 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.29□□□□□ -0.28
Cdx1P18111 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdx1P18111 Gm7977-201ENSMUST00000193787 748 ntBASIC13.29□□□□□ -0.28
Cdx1P18111 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Cdx1P18111 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx1P18111 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cdx1P18111 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms