Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.05□□□□□ -0.32
Efnb3O35393 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.05□□□□□ -0.32
Efnb3O35393 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Efnb3O35393 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.05□□□□□ -0.32
Efnb3O35393 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Efnb3O35393 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Efnb3O35393 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Efnb3O35393 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.04□□□□□ -0.32
Efnb3O35393 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Efnb3O35393 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Efnb3O35393 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Efnb3O35393 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Efnb3O35393 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Gm24841-201ENSMUST00000158676 357 ntBASIC13.04□□□□□ -0.32
Efnb3O35393 Gm18666-201ENSMUST00000190039 958 ntBASIC13.04□□□□□ -0.32
Efnb3O35393 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Efnb3O35393 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Efnb3O35393 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Efnb3O35393 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.04□□□□□ -0.32
Efnb3O35393 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.04□□□□□ -0.32
Efnb3O35393 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.04□□□□□ -0.32
Efnb3O35393 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Efnb3O35393 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Efnb3O35393 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Efnb3O35393 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.03□□□□□ -0.32
Efnb3O35393 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.03□□□□□ -0.32
Efnb3O35393 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.03□□□□□ -0.32
Efnb3O35393 Gm18025-201ENSMUST00000221733 862 ntBASIC13.03□□□□□ -0.32
Efnb3O35393 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Efnb3O35393 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Efnb3O35393 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.03□□□□□ -0.32
Efnb3O35393 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Efnb3O35393 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Efnb3O35393 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Efnb3O35393 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Efnb3O35393 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Efnb3O35393 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.02□□□□□ -0.32
Efnb3O35393 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Efnb3O35393 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Efnb3O35393 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Efnb3O35393 Gm11249-201ENSMUST00000117071 859 ntBASIC13.02□□□□□ -0.33
Efnb3O35393 Gm13158-201ENSMUST00000122007 736 ntBASIC13.02□□□□□ -0.33
Efnb3O35393 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.02□□□□□ -0.33
Efnb3O35393 Gm17661-201ENSMUST00000170317 270 ntBASIC13.02□□□□□ -0.33
Efnb3O35393 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Efnb3O35393 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.02□□□□□ -0.33
Efnb3O35393 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.02□□□□□ -0.33
Efnb3O35393 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.02□□□□□ -0.33
Efnb3O35393 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Efnb3O35393 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Efnb3O35393 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Efnb3O35393 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Efnb3O35393 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Efnb3O35393 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms