Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Mir8112-201ENSMUST00000184382 131 ntBASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-2D3Z4R4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Nkx6-2D3Z4R4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-2D3Z4R4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms