Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm17661-201ENSMUST00000170317 270 ntBASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.79□□□□□ -0.04
Trbv20A0A0B4J1H5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm24841-201ENSMUST00000158676 357 ntBASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm42642-201ENSMUST00000200683 355 ntBASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.78□□□□□ -0.04
Trbv20A0A0B4J1H5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv20A0A0B4J1H5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv20A0A0B4J1H5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.77□□□□□ -0.04
Trbv20A0A0B4J1H5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv20A0A0B4J1H5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trbv20A0A0B4J1H5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv20A0A0B4J1H5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv20A0A0B4J1H5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Trbv20A0A0B4J1H5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trbv20A0A0B4J1H5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Trbv20A0A0B4J1H5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Trbv20A0A0B4J1H5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Gm27000-201ENSMUST00000182943 842 ntBASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Trbv20A0A0B4J1H5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms