Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-1A0A075B699 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-1A0A075B699 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav9d-1A0A075B699 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-1A0A075B699 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-1A0A075B699 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-1A0A075B699 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav9d-1A0A075B699 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-1A0A075B699 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-1A0A075B699 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Gm7791-201ENSMUST00000219066 539 ntBASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-1A0A075B699 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Il3ra-202ENSMUST00000223589 738 ntBASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-1A0A075B699 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Timm23-208ENSMUST00000226683 750 ntBASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-1A0A075B699 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav9d-1A0A075B699 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-1A0A075B699 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav9d-1A0A075B699 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav9d-1A0A075B699 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-1A0A075B699 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav9d-1A0A075B699 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-1A0A075B699 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-1A0A075B699 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-1A0A075B699 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav9d-1A0A075B699 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav9d-1A0A075B699 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-1A0A075B699 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-1A0A075B699 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav9d-1A0A075B699 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav9d-1A0A075B699 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms