Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv1A0A075B657 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Gm27275-201ENSMUST00000184318 272 ntBASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Gm10602-201ENSMUST00000098239 609 ntBASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv1A0A075B657 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Gm18958-201ENSMUST00000174258 762 ntBASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv1A0A075B657 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms