Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-1-dv6d-1A0A075B624 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gm18958-201ENSMUST00000174258 762 ntBASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms