Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 RAB9BP1-201ENST00000519581 626 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC138701.1-201ENST00000524329 714 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 SS18L2P2-201ENST00000583960 235 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 PCNAP1-202ENST00000595299 752 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC245036.5-201ENST00000596330 847 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 VIS1.1-201ENST00000610517 203 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 MIR6895-201ENST00000613497 78 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 MIR6731-201ENST00000614863 72 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC069209.1-201ENST00000619282 651 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC010338.1-201ENST00000621823 717 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC103798.2-201ENST00000624292 632 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
LINC01558Q9Y6Z2 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
LINC01558Q9Y6Z2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
LINC01558Q9Y6Z2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
LINC01558Q9Y6Z2 SDAD1P1-202ENST00000524156 2051 ntBASIC1.59□□□□□ -2.16
LINC01558Q9Y6Z2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 PABPC1P7-201ENST00000413177 1513 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 RNU6-629P-201ENST00000384061 103 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 RPL23AP59-201ENST00000399415 461 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 HNRNPDP2-201ENST00000406475 478 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC108032.1-201ENST00000416706 207 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 RPS15AP40-201ENST00000419621 391 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AL645937.1-202ENST00000421799 937 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AL513175.2-201ENST00000422071 443 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AL606490.7-201ENST00000433136 191 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 RPS7P2-201ENST00000435134 607 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 TBCAP1-201ENST00000436520 327 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 RABEPKP1-201ENST00000440529 1026 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 TPT1P13-201ENST00000449760 499 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 NPM1P13-201ENST00000452663 865 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 RPS24P6-201ENST00000452670 400 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 YWHAEP1-201ENST00000453697 763 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AL035407.2-201ENST00000454090 378 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC024558.1-201ENST00000505008 528 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 MTND3P24-201ENST00000506306 329 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC106872.4-201ENST00000510050 523 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 CDC42P4-201ENST00000510507 563 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC005351.1-201ENST00000511152 786 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 HIGD1AP3-201ENST00000515857 278 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AP000790.1-201ENST00000528891 737 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC022832.1-201ENST00000530718 645 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC007115.1-201ENST00000546853 234 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 NOP56P3-201ENST00000549457 385 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC004825.1-201ENST00000555068 586 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 MIR4436B2-201ENST00000581415 91 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 MIR4436B1-201ENST00000583272 91 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 MIR3922-201ENST00000585192 84 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC009220.3-201ENST00000604318 586 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AC023206.1-201ENST00000605824 298 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 MIR6864-201ENST00000617935 70 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 RPL23AP61-201ENST00000623642 466 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 FAM157B-203ENST00000639350 358 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 GABRG2-229ENST00000641017 3628 ntBASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01558Q9Y6Z2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms