Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 SNORD116-26-201ENST00000516006 96 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 RNA5SP179-201ENST00000517284 121 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 LRRC6P1-201ENST00000532188 885 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 YPEL5P3-201ENST00000547227 352 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 EIF1P6-201ENST00000600054 334 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AL451044.1-201ENST00000604867 238 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AL034351.1-201ENST00000605288 668 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AC140725.3-201ENST00000616193 880 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AL121895.2-201ENST00000619558 447 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AC109809.1-201ENST00000619665 545 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AC097520.1-201ENST00000624435 385 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 ATE1-AS1-202ENST00000636460 506 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AL355578.1-201ENST00000607405 1328 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 RNU6-549P-201ENST00000384433 107 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 RN7SKP156-201ENST00000410308 342 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 RNA5SP44-201ENST00000410446 133 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 PGBD4P8-201ENST00000412993 562 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 RPL37P1-201ENST00000432310 284 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 ELOCP13-201ENST00000443934 329 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 MTND1P33-201ENST00000446251 917 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 PPIAP15-201ENST00000479662 484 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 RN7SL323P-201ENST00000494712 295 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC026407.1-201ENST00000518369 204 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 NDUFA5P2-201ENST00000519723 344 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 EEF1A1P37-201ENST00000522748 715 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC009948.4-201ENST00000604692 675 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 SNORA51-201ENST00000606420 132 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC139769.3-201ENST00000618383 175 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AL139089.1-201ENST00000620372 975 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AL109659.3-201ENST00000624985 950 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 MTCO1P6-201ENST00000481192 1384 ntBASIC3.89□□□□□ -1.79
CSNK1G3Q9Y6M4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 AP002001.2-201ENST00000529025 1469 ntBASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 OR4A15-201ENST00000314706 1035 ntBASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 RNU4-51P-201ENST00000364206 140 ntBASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 RNU6-224P-201ENST00000384055 107 ntBASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 MIR30B-201ENST00000384850 88 ntBASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 SNORA11C-201ENST00000408532 129 ntBASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 RNU6-77P-201ENST00000410554 91 ntBASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 RNU2-6P-201ENST00000411404 190 ntBASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 TRGV6-201ENST00000417928 299 ntBASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 AC114814.2-201ENST00000419195 485 ntBASIC3.88□□□□□ -1.79
CSNK1G3Q9Y6M4 Z97055.1-201ENST00000419730 712 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms