Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 TLK1P1-201ENST00000456760 2440 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 RN7SKP266-201ENST00000410232 287 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 RSU1P3-201ENST00000412878 835 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 RPL26P29-201ENST00000415623 438 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 ATG4AP1-201ENST00000416893 538 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 BX510359.2-201ENST00000417920 305 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AL121878.1-201ENST00000418638 859 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC006548.1-201ENST00000427470 102 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AL117351.1-201ENST00000438864 766 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 RPS5P7-201ENST00000456664 608 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 snoU109.4-201ENST00000458953 143 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 snoU13.3-201ENST00000459441 104 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 RPL5P30-201ENST00000465511 891 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 SCARNA22-201ENST00000503991 125 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 POU5F1P7-201ENST00000508759 541 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC117522.2-201ENST00000510049 657 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 OR5AP1P-201ENST00000529730 940 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 EEF1B2P4-201ENST00000551398 348 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 PSMB7P1-201ENST00000556349 514 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 MIR3936-201ENST00000584304 110 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC103792.1-201ENST00000603591 919 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AL133338.2-201ENST00000604292 736 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC112187.2-201ENST00000604345 283 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC114878.2-201ENST00000604863 1251 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AL390208.1-201ENST00000605885 644 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 MIR8069-1-201ENST00000616627 86 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 MIR8069-2-201ENST00000621412 86 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 CR381572.1-201ENST00000625098 102 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AP003399.1-201ENST00000637534 361 ntBASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL4A3BPQ9Y5P4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.34□□□□□ -1.56
COL4A3BPQ9Y5P4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL4A3BPQ9Y5P4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.34□□□□□ -1.56
COL4A3BPQ9Y5P4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL4A3BPQ9Y5P4 CR383658.2-201ENST00000547576 1525 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC027287.1-201ENST00000553115 1453 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 DHX9P1-201ENST00000436565 3076 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AL513185.3-201ENST00000433335 1300 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 DCAF13P1-201ENST00000495256 1330 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AL161781.1-201ENST00000354277 403 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 RNU6-289P-201ENST00000364093 107 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 MIR192-201ENST00000384915 110 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AL021407.1-201ENST00000404531 386 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 U3.35-201ENST00000408405 208 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AIMP1P1-201ENST00000418670 937 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC092647.1-201ENST00000420654 287 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC098826.1-201ENST00000433943 471 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC005154.2-201ENST00000438110 379 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC073264.2-201ENST00000448886 166 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AL513533.1-201ENST00000453728 415 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 RPS29P33-201ENST00000456717 146 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AL122001.1-201ENST00000457027 370 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 RPL31P3-201ENST00000458430 332 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AP001992.1-205ENST00000462248 379 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AP000942.1-201ENST00000463969 747 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC008897.1-201ENST00000494006 347 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC021678.1-201ENST00000505195 936 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 TXNP6-201ENST00000510190 310 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC068993.1-201ENST00000546724 589 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC133555.2-201ENST00000550213 292 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 MIR4330-201ENST00000579077 105 ntBASIC5.33□□□□□ -1.56
COL4A3BPQ9Y5P4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms