Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC009117.1-201ENST00000563948 554 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 AC006362.1-201ENST00000567392 174 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 RPL23AP97-201ENST00000568955 471 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 BNIP3P26-201ENST00000600827 554 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 NTAN1P1-201ENST00000603150 646 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 AC020910.3-201ENST00000603701 874 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 AL391358.1-201ENST00000605342 190 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 AC087752.4-201ENST00000605911 462 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 AC131235.4-201ENST00000609288 620 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 FAM27B-201ENST00000610601 213 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 AP006248.2-201ENST00000623309 592 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 AC016588.2-201ENST00000632484 3021 ntBASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PCDHGB1Q9Y5G3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 GTF2H2B-203ENST00000508065 1432 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AL139811.1-201ENST00000424779 2299 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC093311.1-201ENST00000506586 2021 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 RN7SKP95-201ENST00000362860 303 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 SNORD65.1-201ENST00000390889 71 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 U3.30-201ENST00000391308 210 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AP000357.1-201ENST00000409926 1165 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 RN7SKP267-201ENST00000410381 285 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 JKAMPP1-201ENST00000413804 919 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 GTF2IP23-201ENST00000423746 351 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC073069.1-201ENST00000428657 441 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 FTH1P16-201ENST00000435241 552 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC002542.1-201ENST00000440683 193 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC009263.1-201ENST00000441193 1239 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 HMGB1P16-201ENST00000447155 540 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 RPL7P18-201ENST00000478965 734 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 WBP1LP4-201ENST00000505043 344 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC010460.1-201ENST00000507087 466 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 IGBP1P5-201ENST00000507524 1000 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 MRPS33P2-201ENST00000507850 322 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC079395.1-201ENST00000510981 262 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 BTF3P13-201ENST00000513224 490 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 IGKV2D-10-201ENST00000520194 281 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 IGJP1-201ENST00000522682 475 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 TOMM20P2-201ENST00000540082 421 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC006539.2-201ENST00000601729 572 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AP003465.2-201ENST00000602571 373 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AL020997.2-201ENST00000602607 184 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC103881.1-201ENST00000603476 538 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC069545.1-201ENST00000605671 358 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC006270.3-201ENST00000605967 1036 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC083809.1-201ENST00000615051 472 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC121761.2-201ENST00000617300 689 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC103858.2-201ENST00000621471 543 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC009878.1-201ENST00000621819 340 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC016717.3-201ENST00000624730 554 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC116618.1-201ENST00000634617 774 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 OR11H5P-202ENST00000641612 1325 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms