Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 RNU6-99P-201ENST00000364721 107 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AL451142.1-201ENST00000375867 775 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 RNA5SP219-201ENST00000390940 113 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 MIR450B-201ENST00000401182 78 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 RNA5SP198-201ENST00000410376 127 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 RN7SKP281-201ENST00000410472 352 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 RPL21P50-201ENST00000417698 477 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AL031736.2-201ENST00000426573 787 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 GAPDHP23-201ENST00000444823 993 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 PPIAP20-201ENST00000449839 135 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AC104564.1-201ENST00000493028 407 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AC116337.1-201ENST00000509680 687 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AC106800.3-201ENST00000511389 308 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AC087854.1-201ENST00000519706 414 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 OR8R1P-201ENST00000543943 764 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 RN7SL802P-201ENST00000577858 299 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AL365434.2-201ENST00000607979 234 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 MIR6128-201ENST00000615528 109 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AL445363.3-201ENST00000623080 671 ntBASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
PCDHB11Q9Y5F2 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.21□□□□□ -1.41
PCDHB11Q9Y5F2 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.21□□□□□ -1.41
PCDHB11Q9Y5F2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
PCDHB11Q9Y5F2 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC105235.1-201ENST00000623208 1816 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC092079.1-201ENST00000558620 1985 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-562P-201ENST00000362731 107 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 SNORD16-201ENST00000362803 99 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-1243P-201ENST00000364028 107 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 LCN1P2-201ENST00000372030 223 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 Y_RNA.496-201ENST00000384444 101 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC004386.1-201ENST00000393214 761 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 SNORA77.2-201ENST00000408571 112 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-387P-201ENST00000411331 105 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC080125.1-201ENST00000414888 684 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 OSTCP4-201ENST00000424397 449 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC105402.2-201ENST00000438503 358 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AL645936.1-201ENST00000441979 518 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 MED28P3-201ENST00000444288 531 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AL353691.1-201ENST00000451332 387 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 SCARNA18-201ENST00000459004 134 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 GM2AP2-201ENST00000491764 562 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 HMGB1P21-201ENST00000502313 581 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC116655.1-201ENST00000508324 901 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 RNA5SP418-201ENST00000515951 117 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 Y_RNA.708-201ENST00000516950 96 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 IGKV1D-22-201ENST00000518953 324 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 WBP1LP3-201ENST00000523033 208 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms