Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PKP3Q9Y446 RNU6-657P-201ENST00000383904 107 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 RNU6-921P-201ENST00000384361 107 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 RPL23AP29-201ENST00000397284 453 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 RPL26P29-201ENST00000415623 438 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 RPL12P34-201ENST00000424532 479 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 SDCBPP2-201ENST00000424643 885 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 RPL36P19-201ENST00000430744 301 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 VN1R108P-201ENST00000431580 830 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC098826.1-201ENST00000433943 471 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC114495.1-201ENST00000441274 436 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 RPS26P56-201ENST00000444468 240 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC009961.3-201ENST00000449832 765 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 RPS29P33-201ENST00000456717 146 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 snoU13.1-201ENST00000459157 104 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC010301.1-201ENST00000473936 355 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC072039.1-201ENST00000477611 581 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 STMN1P2-201ENST00000508435 439 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AF186190.1-201ENST00000517470 480 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC068446.3-201ENST00000555285 382 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 SULT1C2P1-202ENST00000562418 459 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 MIR4715-201ENST00000584117 79 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 SNORD39.3-201ENST00000584451 71 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 SLC25A36P1-201ENST00000590111 465 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 VN1R92P-201ENST00000598511 928 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC135507.1-201ENST00000607214 561 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AL359535.1-201ENST00000612100 1087 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AL138721.1-201ENST00000616756 179 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 MIR6891-201ENST00000618788 93 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AL031667.3-201ENST00000620124 655 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC008443.7-201ENST00000622195 246 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 AC091965.5-201ENST00000624785 342 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.41□□□□□ -1.7
PKP3Q9Y446 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PKP3Q9Y446 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
PKP3Q9Y446 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
PKP3Q9Y446 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PKP3Q9Y446 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PKP3Q9Y446 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PKP3Q9Y446 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.4□□□□□ -1.7
PKP3Q9Y446 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.4□□□□□ -1.7
PKP3Q9Y446 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PKP3Q9Y446 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
PKP3Q9Y446 OR5P1P-201ENST00000299512 925 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 RNU1-130P-201ENST00000363930 160 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 Y_RNA.318-201ENST00000365131 97 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.4□□□□□ -1.71
PKP3Q9Y446 RNU6-441P-201ENST00000384545 106 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PKP3Q9Y446 RNU6-920P-201ENST00000410926 92 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 TMSB10P2-201ENST00000416049 131 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 UBTFL3-201ENST00000418934 1024 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 NIPA2P1-201ENST00000426223 976 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 AC105402.2-201ENST00000438503 358 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 AL357520.1-201ENST00000441557 453 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 CEACAMP9-201ENST00000442990 513 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 RPL26P28-201ENST00000451325 435 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 DHFRP3-201ENST00000455595 559 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.4□□□□□ -1.71
PKP3Q9Y446 UBTFL6-201ENST00000477929 1024 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 AC108078.3-201ENST00000502633 489 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PKP3Q9Y446 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.4□□□□□ -1.71
PKP3Q9Y446 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PKP3Q9Y446 RNU6-583P-201ENST00000516012 92 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.4□□□□□ -1.71
PKP3Q9Y446 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.4□□□□□ -1.71
PKP3Q9Y446 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.4□□□□□ -1.71
PKP3Q9Y446 AL121766.1-201ENST00000547436 487 ntBASIC4.4□□□□□ -1.71
PKP3Q9Y446 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.4□□□□□ -1.71
PKP3Q9Y446 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.4□□□□□ -1.71
PKP3Q9Y446 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms