Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 RNU6-543P-201ENST00000362576 108 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 SNORD6-201ENST00000365444 73 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 SOD2P1-201ENST00000396543 562 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 HMGB3P18-201ENST00000406327 590 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 RN7SKP202-201ENST00000410439 330 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AC245054.1-201ENST00000420944 258 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 ETF1P3-201ENST00000430422 1160 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AC007389.2-201ENST00000434630 306 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 RRM2P4-201ENST00000441721 562 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 NOTCH2P1-201ENST00000443481 624 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 RPL21P133-201ENST00000443666 476 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AC125238.1-201ENST00000448842 249 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 RPL9P32-201ENST00000464118 620 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 MTCO2P9-201ENST00000503214 694 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 HMGN1P11-201ENST00000508668 303 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AC121161.1-201ENST00000510606 652 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 NDUFB4P9-201ENST00000511646 388 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AP000916.1-201ENST00000533869 835 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 CR383656.14-201ENST00000551951 406 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AC012254.4-201ENST00000588843 273 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AC009948.4-201ENST00000604692 675 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AL391497.1-201ENST00000608671 547 ntBASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 AC022031.1-201ENST00000585985 2593 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 MIR16-2-201ENST00000362117 81 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 U8.11-201ENST00000384699 133 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 U8.12-201ENST00000384701 133 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 PRELID3BP11-201ENST00000414230 479 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 RPL7P55-201ENST00000450522 746 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 RPL12P26-201ENST00000452430 487 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 TVP23BP2-201ENST00000455082 615 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 U8.18-201ENST00000459285 133 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 RPL7P15-201ENST00000461190 712 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 AP002884.2-201ENST00000471647 395 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 AC021205.2-201ENST00000480069 347 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 RNU6-579P-201ENST00000516879 102 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 RANP9-201ENST00000519957 271 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 AC113192.3-201ENST00000529152 742 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 OR4U1P-201ENST00000554958 912 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 AL845331.3-202ENST00000562856 261 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 AL158211.2-201ENST00000607282 395 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 AC084824.5-201ENST00000612009 413 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 RMST_10.1-201ENST00000616309 154 ntBASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
TRAPPC4Q9Y296 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 DCAF13P1-201ENST00000495256 1330 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 RNA5SP42-201ENST00000364278 115 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 ATF1P1-201ENST00000406040 927 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 RNU6ATAC-201ENST00000408749 126 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC093422.3-201ENST00000428506 305 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 ELOCP6-201ENST00000429066 328 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AL512637.2-201ENST00000431287 1256 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 B3GNT2P1-201ENST00000434960 952 ntBASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAPPC4Q9Y296 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms