Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
PHF8Q9UPP1 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
PHF8Q9UPP1 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
PHF8Q9UPP1 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC8.22□□□□□ -1.09
PHF8Q9UPP1 EEF1A1P24-201ENST00000451469 1378 ntBASIC8.22□□□□□ -1.09
PHF8Q9UPP1 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.21□□□□□ -1.09
PHF8Q9UPP1 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PHF8Q9UPP1 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PHF8Q9UPP1 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PHF8Q9UPP1 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8.21□□□□□ -1.09
PHF8Q9UPP1 AC009166.2-201ENST00000624410 2833 ntBASIC8.21□□□□□ -1.09
PHF8Q9UPP1 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PHF8Q9UPP1 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
PHF8Q9UPP1 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
PHF8Q9UPP1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC8.21□□□□□ -1.09
PHF8Q9UPP1 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.21□□□□□ -1.09
PHF8Q9UPP1 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 RNU6-179P-201ENST00000363350 107 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 RNU6-770P-201ENST00000363929 105 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 RNU5A-8P-201ENST00000364102 114 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 BPHL-201ENST00000380368 797 ntTSL 5 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 RNU6-432P-201ENST00000384196 109 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 Y_RNA.477-201ENST00000384352 108 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 Y_RNA.483-201ENST00000384380 101 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 Y_RNA.485-201ENST00000384395 102 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 CBX1P4-201ENST00000439415 457 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 RN7SL72P-201ENST00000460697 269 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 RPL7P5-201ENST00000471472 736 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 RPS17P15-201ENST00000475609 349 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 FO393415.2-201ENST00000480085 343 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 AC093270.2-201ENST00000486157 792 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 BX510359.5-201ENST00000515651 304 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 AC132825.6-201ENST00000638861 357 ntBASIC8.21□□□□□ -1.1
PHF8Q9UPP1 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
PHF8Q9UPP1 SALL4P7-201ENST00000555779 3120 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AC093775.1-201ENST00000624154 1868 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 MTCO1P24-201ENST00000515438 1558 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 SNORA51.6-201ENST00000384151 125 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 RNU6-921P-201ENST00000384361 107 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 USMG5P1-201ENST00000425964 177 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 HMGB3P24-201ENST00000433260 622 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 RPS7P3-201ENST00000443360 580 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 LAMTOR5P1-201ENST00000444290 270 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AC108059.3-201ENST00000456388 214 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AC009901.1-201ENST00000506703 541 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 RNU2-10P-201ENST00000516375 211 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AC022868.1-201ENST00000517767 391 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AC022080.3-201ENST00000544433 482 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 HMGB3P26-201ENST00000560051 582 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AL357559.1-201ENST00000622228 274 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AL445363.3-201ENST00000623080 671 ntBASIC8.2□□□□□ -1.1
PHF8Q9UPP1 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PHF8Q9UPP1 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
PHF8Q9UPP1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms