Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 ATP5HP2-201ENST00000433885 485 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC006480.1-201ENST00000449887 378 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC073387.1-201ENST00000453261 709 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 RNU7-170P-201ENST00000459303 61 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC008379.1-201ENST00000463655 464 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AL049830.2-201ENST00000480072 201 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 RN7SL293P-201ENST00000481765 281 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC005726.1-201ENST00000494679 427 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC109458.1-201ENST00000508858 316 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 MTCO1P30-201ENST00000515244 580 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 RNU5A-7P-201ENST00000515979 116 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC025260.1-201ENST00000548858 430 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC020914.4-201ENST00000597690 277 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC133794.1-201ENST00000602731 914 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC010591.1-201ENST00000603941 649 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC083865.1-201ENST00000636634 831 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 U6.98-201ENST00000637157 84 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AP000553.6-201ENST00000641242 118 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC018555.1-201ENST00000567548 1980 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 MIR34B-201ENST00000385076 84 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 ZNF603P-201ENST00000405613 487 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 RPL31P45-201ENST00000419532 356 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 RPL21P23-201ENST00000446654 460 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 PRDX3P3-201ENST00000447765 522 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 RPL21P18-201ENST00000469899 480 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 TRBV12-2-201ENST00000489763 344 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 OR5B10P-201ENST00000532869 642 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC020914.6-201ENST00000594327 272 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 BNIP3P39-201ENST00000601077 554 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AL163642.2-201ENST00000604722 1019 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC012468.1-201ENST00000604888 430 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC007179.3-201ENST00000604976 235 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 HMGB1P50-201ENST00000605814 607 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC144521.1-201ENST00000607148 956 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC021851.1-201ENST00000608537 1082 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AL159169.3-201ENST00000608871 561 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC078880.5-201ENST00000617845 421 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC103858.2-201ENST00000621471 543 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AL357559.1-201ENST00000622228 274 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AL138955.1-201ENST00000622881 1040 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AC243312.2-201ENST00000623340 601 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 AP003072.4-201ENST00000624580 310 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 U6.105-201ENST00000637379 88 ntBASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
APOBEC3BQ9UH17 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBEC3BQ9UH17 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBEC3BQ9UH17 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBEC3BQ9UH17 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBEC3BQ9UH17 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBEC3BQ9UH17 RNU6-98P-201ENST00000384173 107 ntBASIC3.61□□□□□ -1.83
APOBEC3BQ9UH17 HLFP1-201ENST00000402375 499 ntBASIC3.61□□□□□ -1.83
APOBEC3BQ9UH17 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBEC3BQ9UH17 UBE2V1P11-201ENST00000411559 285 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms