Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AL162713.1-201ENST00000604480 262 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC090525.3-201ENST00000605601 189 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC113194.1-201ENST00000606037 500 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AL450489.1-201ENST00000612071 468 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AP005212.4-201ENST00000614206 710 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 MIR7973-1-201ENST00000614683 76 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AL355365.1-201ENST00000616480 294 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 Z83843.1-201ENST00000604070 3685 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 ZNF542P-204ENST00000482727 1305 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 RNU6-317P-201ENST00000384031 107 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 SNORA70E-201ENST00000384492 135 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 MIR200C-201ENST00000384980 68 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 MIR134-201ENST00000385258 73 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AL356967.1-201ENST00000406305 431 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 HMGN1P24-201ENST00000412282 298 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 BX323014.1-201ENST00000412876 237 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 HSFY4P-201ENST00000415994 1181 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AC006960.1-201ENST00000419980 153 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 GTF2IP23-201ENST00000423746 351 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AL392003.1-201ENST00000434394 243 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 B3GNT2P1-201ENST00000434960 952 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 TXNP1-201ENST00000441872 371 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 NPM1P49-201ENST00000448027 714 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 PDSS1P2-201ENST00000449397 678 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AC020898.1-201ENST00000474167 787 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 RPL7P38-201ENST00000488396 739 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AC006499.5-201ENST00000505037 514 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 CCNHP1-201ENST00000513311 678 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 RNA5SP217-201ENST00000515959 91 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AC007458.1-201ENST00000542812 373 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 SNORA51-201ENST00000606420 132 ntBASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VPS29Q9UBQ0 AC087565.3-202ENST00000642085 1603 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 RNA5SP119-201ENST00000362715 117 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 RPL32P35-201ENST00000415214 394 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC245052.5-201ENST00000416320 649 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 BTF3P9-201ENST00000418784 283 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 OR1AA1P-201ENST00000419597 916 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 RPL23AP22-201ENST00000437556 453 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 ELOCP3-201ENST00000439303 348 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC239367.2-201ENST00000447309 705 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC125238.1-201ENST00000448842 249 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 MORF4L1P4-201ENST00000450245 976 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC104629.2-201ENST00000468627 598 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC021678.1-201ENST00000505195 936 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 SAP18P1-201ENST00000512058 390 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 RNU1-143P-201ENST00000516296 146 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC006518.1-201ENST00000541449 943 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC034105.4-201ENST00000568304 277 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC073657.2-201ENST00000605661 303 ntBASIC3.11□□□□□ -1.91
VPS29Q9UBQ0 AC018754.1-201ENST00000607486 925 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms