Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RN7SKP283-201ENST00000517197 270 ntBASIC2.99□□□□□ -1.93
CHD7Q9P2D1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 MIR4738-201ENST00000579134 87 ntBASIC2.99□□□□□ -1.93
CHD7Q9P2D1 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 MTCO1P52-201ENST00000433928 531 ntBASIC2.99□□□□□ -1.93
CHD7Q9P2D1 AC008837.1-201ENST00000511513 412 ntBASIC2.99□□□□□ -1.93
CHD7Q9P2D1 SNORA31.21-201ENST00000517180 77 ntBASIC2.99□□□□□ -1.93
CHD7Q9P2D1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 AC020633.1-201ENST00000468439 2247 ntBASIC2.99□□□□□ -1.93
CHD7Q9P2D1 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHD7Q9P2D1 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CHD7Q9P2D1 MIR448-201ENST00000362131 111 ntBASIC2.98□□□□□ -1.93
CHD7Q9P2D1 Y_RNA.466-201ENST00000384294 113 ntBASIC2.98□□□□□ -1.93
CHD7Q9P2D1 MIR4648-201ENST00000580107 72 ntBASIC2.98□□□□□ -1.93
CHD7Q9P2D1 AC074276.2-201ENST00000619891 348 ntBASIC2.98□□□□□ -1.93
CHD7Q9P2D1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CHD7Q9P2D1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CHD7Q9P2D1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.98□□□□□ -1.93
CHD7Q9P2D1 RNVU1-3-201ENST00000364313 161 ntBASIC2.98□□□□□ -1.93
CHD7Q9P2D1 AC110754.1-201ENST00000399740 601 ntBASIC2.98□□□□□ -1.93
CHD7Q9P2D1 AL591806.2-201ENST00000433122 173 ntBASIC2.98□□□□□ -1.93
CHD7Q9P2D1 AL590103.1-201ENST00000434488 307 ntBASIC2.98□□□□□ -1.93
CHD7Q9P2D1 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.98□□□□□ -1.93
CHD7Q9P2D1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.98□□□□□ -1.93
CHD7Q9P2D1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.98□□□□□ -1.93
CHD7Q9P2D1 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC2.98□□□□□ -1.93
CHD7Q9P2D1 THAP12P8-201ENST00000447914 2115 ntBASIC2.98□□□□□ -1.93
CHD7Q9P2D1 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CHD7Q9P2D1 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CHD7Q9P2D1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHD7Q9P2D1 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 RNA5SP508-201ENST00000411327 119 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AC010469.1-201ENST00000463864 576 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AC006971.1-201ENST00000407916 4486 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 RPS3AP26-201ENST00000398259 784 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AC010468.1-201ENST00000461022 817 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AC010401.1-201ENST00000463867 348 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AC007954.1-201ENST00000554198 494 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AC009163.5-201ENST00000575421 637 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 FAM35DP-201ENST00000323387 2712 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 MTCO1P9-201ENST00000505577 1534 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AL079342.1-201ENST00000401460 267 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 RNA5SP31-201ENST00000411144 127 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 FAM103A2P-201ENST00000444122 354 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AC112184.1-201ENST00000505179 312 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 HNRNPKP5-201ENST00000515300 253 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 RNA5SP282-201ENST00000516355 108 ntBASIC2.97□□□□□ -1.93
CHD7Q9P2D1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.97□□□□□ -1.93
CHD7Q9P2D1 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.93
CHD7Q9P2D1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
CHD7Q9P2D1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 VN1R48P-201ENST00000448149 1036 ntBASIC2.96□□□□□ -1.94
CHD7Q9P2D1 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 AC011270.1-201ENST00000558606 583 ntBASIC2.96□□□□□ -1.94
CHD7Q9P2D1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 AC009977.1-201ENST00000586015 570 ntBASIC2.96□□□□□ -1.94
CHD7Q9P2D1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC2.96□□□□□ -1.94
CHD7Q9P2D1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.96□□□□□ -1.94
CHD7Q9P2D1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 TOPORSLP1-201ENST00000467693 2102 ntBASIC2.95□□□□□ -1.94
CHD7Q9P2D1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms