Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC006480.1-201ENST00000449887 378 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 TRBV26-201ENST00000456572 344 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 RPS26P39-201ENST00000469206 341 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC078785.3-201ENST00000476607 425 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 AL163973.1-201ENST00000484753 577 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 EIF4EP3-201ENST00000498782 656 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 IGBP1P4-201ENST00000503202 879 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC093815.1-201ENST00000508637 280 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 RNU6-347P-201ENST00000516658 105 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 RNU6-1314P-201ENST00000517139 104 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 MIR4742-201ENST00000581069 85 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC008638.3-201ENST00000603341 463 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 AC025574.2-201ENST00000615621 514 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 CR381572.1-201ENST00000625098 102 ntBASIC6.08□□□□□ -1.44
CNTN3Q9P232 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CNTN3Q9P232 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNTN3Q9P232 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 Z95114.1-201ENST00000624264 14574 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 AL445437.1-201ENST00000623157 3087 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 RNA5SP234-201ENST00000363916 119 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 RPL32P23-201ENST00000397237 405 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 RPL31P52-201ENST00000407532 367 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 MIR548P-201ENST00000408336 84 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 RPL26P29-201ENST00000415623 438 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 CACYBPP2-201ENST00000453625 678 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 RNU6-329P-201ENST00000459618 107 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 SNORD19B-201ENST00000459623 84 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 AC006511.1-201ENST00000470614 315 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 AC233702.1-201ENST00000482905 502 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 RN7SL184P-201ENST00000488308 297 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 AC093267.1-201ENST00000489176 961 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 RPL23AP72-201ENST00000492447 435 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 KLHL2P1-201ENST00000508691 521 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 TRMT10BP1-201ENST00000519377 943 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 IGKV2-18-201ENST00000522607 343 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 AC012616.1-201ENST00000600294 197 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 AC116447.1-201ENST00000613153 453 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 AL512624.1-201ENST00000613638 469 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 AC009318.4-201ENST00000620496 486 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 OR2L1P-202ENST00000641567 1023 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 NLRP3P1-201ENST00000622303 1785 ntBASIC6.07□□□□□ -1.44
CNTN3Q9P232 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTN3Q9P232 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.07□□□□□ -1.44
CNTN3Q9P232 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTN3Q9P232 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms