Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 RPS20P14-201ENST00000412545 360 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 OR4K6P-201ENST00000416478 897 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC098592.1-201ENST00000419352 333 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 DYNLL1P7-201ENST00000429273 258 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 MRPS10P2-201ENST00000431226 381 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 GTF2IP7-202ENST00000436677 309 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 YWHAZP7-201ENST00000436906 631 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC007327.1-201ENST00000447461 264 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC021205.1-201ENST00000468797 348 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 CCDC75P1-201ENST00000469247 791 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 PPBPP1-201ENST00000510807 373 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 Y_RNA.695-201ENST00000516715 107 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC083923.1-201ENST00000523708 376 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AL121766.1-201ENST00000547436 487 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC069240.1-201ENST00000548774 375 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC025260.1-201ENST00000548858 430 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 NBEAP1-201ENST00000554452 979 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC108747.1-201ENST00000609508 535 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC004223.4-201ENST00000612426 332 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC139769.3-201ENST00000618383 175 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC009509.4-201ENST00000619202 509 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC009878.1-201ENST00000621819 340 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC007342.8-201ENST00000623278 678 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 NXPH1-205ENST00000602349 1953 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 NSRP1P1-201ENST00000444067 1693 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 SPRR2C-201ENST00000290702 219 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 Y_RNA.560-201ENST00000384689 102 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL161909.1-201ENST00000397390 712 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL583835.1-201ENST00000399570 407 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 USP9YP33-201ENST00000412220 421 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 FCF1P9-201ENST00000412546 282 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 MTCO2P34-201ENST00000421994 607 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 OR6K4P-201ENST00000423179 955 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL158073.1-201ENST00000426848 1104 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 UBE2V1P3-201ENST00000439651 417 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL357520.1-201ENST00000441557 453 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL109741.2-201ENST00000455561 343 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 RPL35P6-201ENST00000490024 372 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AC112198.1-201ENST00000505369 1220 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 ATP1B1P1-201ENST00000509767 915 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AC008958.1-201ENST00000511047 682 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL139174.1-201ENST00000531489 886 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.51□□□□□ -1.69
EBF3Q9H4W6 AP005205.1-201ENST00000563503 508 ntBASIC4.51□□□□□ -1.69
EBF3Q9H4W6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 336.2 ms