Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 EXOC5P1-201ENST00000510543 1969 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 SNORA48.7-201ENST00000391302 135 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AL138878.1-201ENST00000405131 347 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC017083.1-201ENST00000428093 483 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AL365396.1-201ENST00000430854 671 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 RNFT1P2-201ENST00000443064 757 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC044797.1-201ENST00000445744 679 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 MRPL35P4-201ENST00000453682 566 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 RPS20P32-201ENST00000456044 356 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AP000873.1-201ENST00000463987 400 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 OR8K2P-201ENST00000524645 927 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC020914.6-201ENST00000594327 272 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 ZNF92P2-201ENST00000600543 1059 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC005972.3-201ENST00000606304 481 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC069209.1-201ENST00000619282 651 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 OR8B1P-202ENST00000641132 1178 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC119674.1-207ENST00000641355 633 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 TNPO1P3-201ENST00000436471 2662 ntBASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCSER1Q9C0I3 MTND4P10-201ENST00000446199 1363 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 MTND5P3-201ENST00000438536 1800 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 SNORD3H-201ENST00000384486 214 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 MIR525-201ENST00000384978 85 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 RPL21P17-201ENST00000397467 475 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 MTND4P22-201ENST00000413116 1169 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 VN1R42P-201ENST00000424651 344 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 MTATP6P11-201ENST00000428071 670 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 BMS1P19-201ENST00000433925 393 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 MTND4P15-201ENST00000437913 1033 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 UBE2V1P5-201ENST00000440070 405 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC009263.1-201ENST00000441193 1239 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 RPS3AP46-201ENST00000448352 682 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC233982.1-201ENST00000451247 436 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC008280.2-201ENST00000455473 307 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 HMGB3P30-201ENST00000457863 606 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 COL6A4P2-205ENST00000509855 506 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 NDUFB4P9-201ENST00000511646 388 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 RNU1-95P-201ENST00000516357 160 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 RNU1-128P-201ENST00000516704 160 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 TRMT10BP1-201ENST00000519377 943 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC104229.1-201ENST00000561364 255 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC106734.1-201ENST00000568646 663 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC091488.1-201ENST00000604239 660 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AL391497.1-201ENST00000608671 547 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 RNU6-156P-201ENST00000621869 107 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC006065.5-201ENST00000623427 349 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC138649.5-201ENST00000637456 137 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 AC068647.1-201ENST00000489539 2265 ntBASIC4.02□□□□□ -1.77
CCSER1Q9C0I3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCSER1Q9C0I3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCSER1Q9C0I3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCSER1Q9C0I3 AC008432.1-201ENST00000615912 1320 ntBASIC4.01□□□□□ -1.77
CCSER1Q9C0I3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCSER1Q9C0I3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCSER1Q9C0I3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCSER1Q9C0I3 SNORD9-201ENST00000362566 104 ntBASIC4.01□□□□□ -1.77
CCSER1Q9C0I3 RNA5SP235-201ENST00000365411 114 ntBASIC4.01□□□□□ -1.77
CCSER1Q9C0I3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCSER1Q9C0I3 SNORA5A-201ENST00000384111 134 ntBASIC4.01□□□□□ -1.77
CCSER1Q9C0I3 ATP5F1P3-201ENST00000397213 657 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms