Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PDCL2P2-201ENST00000533651 189 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AL355365.1-201ENST00000616480 294 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 MIR8057-201ENST00000620957 69 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AC004943.3-201ENST00000624116 600 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 RNU1-70P-201ENST00000362618 164 ntBASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 AC009965.2-201ENST00000425328 970 ntBASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 ETF1P3-201ENST00000430422 1160 ntBASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 RPS15AP29-201ENST00000445539 400 ntBASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 RN7SL442P-201ENST00000473804 320 ntBASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 RPS4XP22-201ENST00000480755 780 ntBASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 FABP5P12-201ENST00000515543 389 ntBASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 AC116312.1-201ENST00000606841 314 ntBASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 AC015802.5-201ENST00000607478 399 ntBASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 MIR7851-201ENST00000610611 160 ntBASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 AC004972.1-201ENST00000623934 2209 ntBASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.98□□□□□ -1.77
UPF3BQ9BZI7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 HSPA8P19-201ENST00000505359 1517 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 CR383658.2-201ENST00000547576 1525 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 RNU1-75P-201ENST00000347264 129 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 U3.15-201ENST00000365398 212 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 RPL31P12-201ENST00000422587 358 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 RPL30P3-201ENST00000424262 333 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 FAR1P1-201ENST00000427163 934 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 HMGB3P11-201ENST00000440127 604 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 CFTRP1-201ENST00000456646 183 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 RPL37P3-201ENST00000456825 293 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 HMGB1P21-201ENST00000502313 581 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 AC022790.1-201ENST00000522872 204 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 RMST_5.1-201ENST00000618704 126 ntBASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
UPF3BQ9BZI7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
UPF3BQ9BZI7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
UPF3BQ9BZI7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
UPF3BQ9BZI7 AL365361.1-201ENST00000566942 3481 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AL035425.3-201ENST00000564206 4996 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 SNORA48.5-201ENST00000391143 135 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 BX323014.1-201ENST00000412876 237 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 ARF4P2-201ENST00000430209 526 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AL831737.1-201ENST00000441288 271 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 RN7SKP116-201ENST00000516902 319 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AC104027.1-201ENST00000521887 300 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AC007458.1-201ENST00000542812 373 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AC006504.3-201ENST00000586818 523 ntBASIC3.96□□□□□ -1.78
UPF3BQ9BZI7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms