Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTFDC1Q9BY42 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.33□□□□□ -1.56
RTFDC1Q9BY42 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTFDC1Q9BY42 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTFDC1Q9BY42 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
RTFDC1Q9BY42 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AC006971.1-201ENST00000407916 4486 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 RNA5SP130-201ENST00000364431 114 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 SNORD116-2-201ENST00000384274 95 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 SNORD116-6-201ENST00000384711 96 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 RNU2-21P-201ENST00000410368 188 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 RPS15AP40-201ENST00000419621 391 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AL356276.2-201ENST00000435919 558 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AL606662.1-201ENST00000445763 553 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 RPL18AP17-201ENST00000455326 198 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AC112206.1-201ENST00000468416 477 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 RNU6-583P-201ENST00000516012 92 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 OR5BC1P-201ENST00000529327 739 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AL389895.1-201ENST00000554127 252 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 HNRNPCP4-201ENST00000571636 900 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 AC053481.4-201ENST00000583164 216 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 Z99497.2-201ENST00000603634 310 ntBASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTFDC1Q9BY42 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AL022393.1-201ENST00000625142 1677 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AL731532.2-201ENST00000623542 1953 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AL049555.1-201ENST00000562834 1933 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 RNA5SP151-201ENST00000365632 117 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 MIR554-201ENST00000384874 96 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 CYCSP19-201ENST00000411715 316 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 USP9YP33-201ENST00000412220 421 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 RPL31P2-201ENST00000413849 377 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AC090960.1-201ENST00000421072 306 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 COX6B1P7-201ENST00000430845 235 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 USP9YP35-201ENST00000435696 412 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AL591503.2-201ENST00000442314 1005 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 MTND2P22-201ENST00000444325 1033 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AL162151.2-201ENST00000448875 158 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 DDX39BP2-208ENST00000453923 258 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 RPL7P1-201ENST00000468161 747 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 RPL7P9-201ENST00000468715 747 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AC104685.1-201ENST00000502445 371 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AC147055.4-201ENST00000504399 745 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 KCTD9P2-201ENST00000512203 1013 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AC026412.2-201ENST00000512270 1075 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 RNA5SP519-201ENST00000516480 119 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 RNA5SP73-201ENST00000516744 108 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 RNA5SP143-201ENST00000516936 115 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 RNU6-232P-201ENST00000517144 64 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AC091515.1-201ENST00000548110 679 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AC090888.1-201ENST00000561335 1141 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AC121247.2-201ENST00000604776 136 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AL354984.3-201ENST00000604803 325 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms