Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MTCO3P12-201ENST00000416718 547 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AC096775.1-201ENST00000437724 448 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 HMGB3P9-201ENST00000441799 583 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 SPRYD7P1-201ENST00000443861 570 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 EEF1B2P6-201ENST00000445713 673 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 RPL36AP13-201ENST00000457490 317 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 RPL7P23-201ENST00000493874 747 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AC068305.1-201ENST00000497406 726 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AC020893.1-201ENST00000502452 580 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 snoU109.5-201ENST00000516231 132 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AC096996.1-201ENST00000563813 325 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 MIR4489-201ENST00000578869 62 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AL391646.1-201ENST00000603860 190 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AP000907.4-201ENST00000604143 237 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 BX323046.1-201ENST00000610145 535 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AC093838.1-201ENST00000613014 469 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AL008636.1-201ENST00000625038 1018 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AC019226.1-201ENST00000625666 515 ntBASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.28□□□□□ -1.4
TRAIPQ9BWF2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.4
TRAIPQ9BWF2 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
TRAIPQ9BWF2 AL121839.2-201ENST00000565058 6943 ntBASIC6.27□□□□□ -1.4
TRAIPQ9BWF2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.27□□□□□ -1.4
TRAIPQ9BWF2 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.27□□□□□ -1.4
TRAIPQ9BWF2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC090337.1-201ENST00000579651 2074 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 DDX10P1-201ENST00000448545 1933 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 SNORD56.2-201ENST00000363242 71 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 Y_RNA.256-201ENST00000364594 104 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 RNU6-1283P-201ENST00000365314 105 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 RNU6-754P-201ENST00000391166 107 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 RPL35AP24-201ENST00000413846 330 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 MTCO1P20-201ENST00000425366 358 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC122718.1-201ENST00000439448 744 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 RPL21P89-201ENST00000444021 467 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 FAM133DP-201ENST00000464802 691 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 RN7SL629P-201ENST00000489622 285 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC108693.1-201ENST00000496068 432 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC135721.1-201ENST00000497954 479 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC116353.2-201ENST00000505332 712 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 TOMM22P4-201ENST00000511318 336 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 RN7SKP288-201ENST00000516227 268 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC090616.5-202ENST00000582111 297 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC006115.2-201ENST00000596823 202 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AP001429.1-201ENST00000602568 530 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AL136363.1-201ENST00000605349 337 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC000095.2-202ENST00000637415 154 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 AC087516.1-201ENST00000561236 2428 ntBASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRAIPQ9BWF2 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TRAIPQ9BWF2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms