Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 RNA5SP345-201ENST00000410646 108 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 HMGB1P11-201ENST00000413899 637 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC104837.2-201ENST00000427236 424 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC000111.3-201ENST00000433478 193 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 RPL37P21-201ENST00000435890 276 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AL031663.1-201ENST00000437445 219 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AL354714.3-201ENST00000447284 493 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 PDSS1P2-201ENST00000449397 678 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 NDUFA5P7-201ENST00000452914 242 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AL033528.1-201ENST00000453780 140 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 SNRPFP4-201ENST00000456366 242 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC005229.2-201ENST00000456995 399 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 RN7SL517P-201ENST00000462240 305 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC146507.1-201ENST00000468335 354 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 RPL31P58-201ENST00000469001 379 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 RPL7P24-201ENST00000493052 752 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 KLRA1P-201ENST00000503499 986 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 RNA5SP216-201ENST00000516111 123 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 RNU6-709P-201ENST00000517257 104 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 UBE2FP2-201ENST00000566646 462 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC209154.1-201ENST00000582156 337 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC233280.2-201ENST00000603917 1070 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 MEMO1P5-201ENST00000604810 406 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC131902.3-201ENST00000611767 581 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC091304.9-201ENST00000612091 226 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC025253.1-201ENST00000613623 543 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC104010.1-201ENST00000616889 150 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 FAM157B-203ENST00000639350 358 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AL034370.1-201ENST00000397254 1590 ntBASIC5.59□□□□□ -1.52
CHAMP1Q96JM3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
CHAMP1Q96JM3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 SNORA17.1-201ENST00000362945 126 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 RNA5SP428-201ENST00000365129 132 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 SNORD115-47-201ENST00000391226 86 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC025750.1-201ENST00000399891 379 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 VN1R8P-201ENST00000407739 893 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 USP9YP6-201ENST00000413550 854 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 USP9YP13-201ENST00000417797 480 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC092162.1-201ENST00000432828 434 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 RPL7P11-201ENST00000437586 658 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 RPL7P36-201ENST00000444633 681 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 GDI2P2-201ENST00000445131 608 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 USP9YP34-201ENST00000453983 808 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AL133244.1-201ENST00000456007 258 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 DEFB109F-201ENST00000491870 277 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 FCF1P3-201ENST00000496394 590 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 FAM92A1P2-202ENST00000504766 877 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 RNU6-528P-201ENST00000516926 100 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 OR5M7P-201ENST00000526140 972 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC138649.3-201ENST00000622154 254 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC099494.2-201ENST00000623371 978 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 AC231657.1-201ENST00000624313 397 ntBASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.58□□□□□ -1.52
CHAMP1Q96JM3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms