Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SNRPEP2-201ENST00000397592 279 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 SSXP10-201ENST00000402595 565 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AC073264.1-201ENST00000411508 416 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AL138785.1-201ENST00000425821 331 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AL445567.1-201ENST00000439121 144 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 HMGB3P21-201ENST00000452483 547 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AC005008.1-201ENST00000456151 612 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 HMGB3P13-201ENST00000511263 607 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 SNORD116-26-201ENST00000516006 96 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 RNU6-759P-201ENST00000516740 103 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AL356057.1-201ENST00000533798 831 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 BPIFA4P-203ENST00000603168 689 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AP000811.1-201ENST00000603803 651 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AC004223.4-201ENST00000612426 332 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AP003399.1-201ENST00000637534 361 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 OR52H1-202ENST00000641796 1061 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 MTND4P34-201ENST00000572715 1371 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 SNRPEP3-201ENST00000338402 276 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 Y_RNA.18-201ENST00000362461 102 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 MIR708-201ENST00000390708 88 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 RNA5SP397-201ENST00000391323 118 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 RPL23AP29-201ENST00000397284 453 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 SKINT1L-201ENST00000401057 817 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 RPS15AP38-201ENST00000413110 372 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 RPS15AP40-201ENST00000419621 391 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 RPL18P10-201ENST00000425606 538 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 VN1R10P-201ENST00000447106 875 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 RPL26P28-201ENST00000451325 435 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 RPS20P21-201ENST00000466859 343 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 DEFB109F-201ENST00000491870 277 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 MTCYBP17-201ENST00000503579 789 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC021146.3-201ENST00000511911 260 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC026412.2-201ENST00000512270 1075 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 RNU6-583P-201ENST00000516012 92 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC008127.2-201ENST00000549925 1075 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AL389895.1-201ENST00000554127 252 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC084783.1-201ENST00000565846 910 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC072039.2-201ENST00000608883 439 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AL392048.1-201ENST00000613946 534 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC083809.1-201ENST00000615051 472 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AC091931.1-201ENST00000623488 728 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 AF246928.1-201ENST00000623768 87 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 ELL2P4-201ENST00000446870 1376 ntBASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHMP4CQ96CF2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms