Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AP003117.1-201ENST00000602771 554 ntBASIC3.64□□□□□ -1.83
CCDC112Q8NEF3 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC112Q8NEF3 AL159169.3-201ENST00000608871 561 ntBASIC3.64□□□□□ -1.83
CCDC112Q8NEF3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.64□□□□□ -1.83
CCDC112Q8NEF3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC112Q8NEF3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC112Q8NEF3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CCDC112Q8NEF3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC112Q8NEF3 AC090337.1-201ENST00000579651 2074 ntBASIC3.64□□□□□ -1.83
CCDC112Q8NEF3 CR383658.2-201ENST00000547576 1525 ntBASIC3.64□□□□□ -1.83
CCDC112Q8NEF3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC112Q8NEF3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC112Q8NEF3 AC138915.3-201ENST00000562908 1389 ntBASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 MIR320B1-201ENST00000390209 79 ntBASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 AC007066.1-201ENST00000392902 381 ntBASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 RN7SKP58-201ENST00000411010 305 ntBASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 AC092451.1-201ENST00000480211 153 ntBASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 CDH12P2-201ENST00000504393 298 ntBASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 OR5H4P-201ENST00000510851 923 ntBASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 AP001148.1-201ENST00000624124 2359 ntBASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 AC005183.1-201ENST00000603687 1979 ntBASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC112Q8NEF3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 RNU6-525P-201ENST00000363685 104 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 SNORA46-201ENST00000384762 135 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 BMS1P22-201ENST00000414726 313 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 RPS7P15-201ENST00000415804 584 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 MTCO1P52-201ENST00000433928 531 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AC104978.1-201ENST00000449387 391 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 UQCRHP3-201ENST00000451503 251 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 U3.44-201ENST00000458938 192 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 SNRPGP3-201ENST00000469405 227 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 RPL21P18-201ENST00000469899 480 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 TMED11P-201ENST00000479478 690 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AC106707.2-201ENST00000484182 374 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 CAB39P1-201ENST00000502277 460 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AC104619.4-201ENST00000510773 249 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 SNORA70.17-201ENST00000516449 133 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AC015917.1-201ENST00000579654 510 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AC020914.6-201ENST00000594327 272 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AC007687.1-201ENST00000602704 304 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AP003117.2-201ENST00000606010 545 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 MIR7851-201ENST00000610611 160 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AL591516.1-201ENST00000611326 274 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 uc_338.1-201ENST00000612113 180 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 RMST_5.1-201ENST00000618704 126 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AL356321.1-201ENST00000621360 228 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AC119674.1-207ENST00000641355 633 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 XPOTP1-201ENST00000443317 2398 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 AF127577.6-201ENST00000623352 2191 ntBASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC112Q8NEF3 RNA5SP51-201ENST00000364750 119 ntBASIC3.61□□□□□ -1.83
CCDC112Q8NEF3 AC234772.1-201ENST00000377927 937 ntBASIC3.61□□□□□ -1.83
CCDC112Q8NEF3 RN7SKP123-201ENST00000410732 291 ntBASIC3.61□□□□□ -1.83
CCDC112Q8NEF3 PRELID3BP11-201ENST00000414230 479 ntBASIC3.61□□□□□ -1.83
CCDC112Q8NEF3 AC245054.2-201ENST00000415639 319 ntBASIC3.61□□□□□ -1.83
CCDC112Q8NEF3 TRGV6-201ENST00000417928 299 ntBASIC3.61□□□□□ -1.83
CCDC112Q8NEF3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC112Q8NEF3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC112Q8NEF3 RPS15AP29-201ENST00000445539 400 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms