Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AL391156.1-201ENST00000554965 554 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC006362.1-201ENST00000567392 174 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC008507.1-201ENST00000587506 734 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC012360.2-201ENST00000609349 391 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC006927.3-201ENST00000638789 384 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 SMG1P6-201ENST00000532337 2930 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC125257.1-201ENST00000560400 2930 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC090017.1-201ENST00000548612 1779 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 TLK1P1-201ENST00000456760 2440 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 RNU6-251P-201ENST00000363235 104 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 OR5H15-201ENST00000383696 930 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 RPL23AP29-201ENST00000397284 453 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 Z98745.1-201ENST00000402553 494 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 RN7SKP142-201ENST00000411236 328 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 RPL6P29-201ENST00000414863 865 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 MTCYBP38-201ENST00000417160 1123 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC006366.1-201ENST00000422002 759 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 GOT2P5-201ENST00000433995 546 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 RPS17P8-201ENST00000434525 335 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 MUPP-201ENST00000438111 566 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 MTND1P34-201ENST00000438556 671 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 RPL21P89-201ENST00000444021 467 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 SLC31A1P1-201ENST00000451221 567 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 PRPF38AP1-201ENST00000451976 933 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 USP9YP10-201ENST00000454868 628 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 RPL18AP17-201ENST00000455326 198 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC041039.1-201ENST00000485656 536 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 RPL36AP41-201ENST00000493820 306 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC108475.1-201ENST00000507880 950 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 USP9YP5-201ENST00000511770 630 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 NPM1P41-201ENST00000512920 831 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC127024.5-201ENST00000580085 462 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC020914.6-201ENST00000594327 272 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC069304.2-201ENST00000605154 435 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AL031775.1-201ENST00000607014 887 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC024560.3-201ENST00000608482 349 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC106028.5-201ENST00000610332 395 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC015908.5-201ENST00000623289 343 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC079228.1-201ENST00000624774 1049 ntBASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMC1BQ8NDV3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AL118496.1-201ENST00000440201 1812 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 RPL21P132-201ENST00000331267 462 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 RNU4-21P-201ENST00000362802 126 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 Y_RNA.111-201ENST00000363248 100 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms