Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC104837.2-201ENST00000427236 424 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC119618.1-201ENST00000434191 222 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AL138799.3-201ENST00000438968 350 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AL391987.1-201ENST00000441025 200 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 RPS27AP15-201ENST00000447672 466 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 MTND6P5-201ENST00000448266 512 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 OR7E116P-201ENST00000448529 957 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 GAPDHP14-201ENST00000450472 937 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 HIGD1AP8-201ENST00000453927 274 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC110794.1-201ENST00000505816 425 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC021146.1-201ENST00000511202 716 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 RNU6-1088P-201ENST00000516850 104 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AP001804.3-201ENST00000525146 880 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 MTCO3P23-201ENST00000561363 289 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC053481.3-201ENST00000577881 843 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC098848.2-201ENST00000588023 330 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 OR10AB1P-201ENST00000609613 938 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC023509.5-201ENST00000617434 807 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC232271.1-201ENST00000602455 2715 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AC046144.1-201ENST00000478559 1853 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AC138907.8-201ENST00000623981 2256 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AL137141.1-201ENST00000624622 4836 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 OR52B3P-201ENST00000314715 928 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 RPL32P3-201ENST00000359025 275 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 RNU1-150P-201ENST00000362491 162 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 RNU6-1188P-201ENST00000363795 107 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 RNY1P12-201ENST00000364251 105 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 SNORA62.2-201ENST00000364672 152 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 RN7SKP69-201ENST00000365390 305 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AL049697.2-201ENST00000403708 294 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 RNA5SP498-201ENST00000411342 120 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 MTND6P12-201ENST00000428247 522 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 GAPDHP48-201ENST00000436626 961 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AL356010.1-201ENST00000456364 102 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 ELOCP24-201ENST00000456370 334 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AC007998.1-201ENST00000474156 672 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 CR383656.1-201ENST00000484916 377 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AC004062.1-201ENST00000509926 645 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 RN7SKP24-201ENST00000515888 284 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 RNU6-1143P-201ENST00000516125 104 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 RNU6-864P-201ENST00000516256 108 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 RNU6-714P-201ENST00000516963 103 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 IGKV2-19-201ENST00000518132 283 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 IGLV3-30-201ENST00000524362 298 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AC090312.1-201ENST00000580637 348 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 RN7SL753P-201ENST00000581238 290 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AC121334.2-201ENST00000605387 271 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 AL442128.2-201ENST00000620246 1824 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 CDC27P3-201ENST00000635418 1910 ntBASIC5.24□□□□□ -1.57
ATG4DQ86TL0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4DQ86TL0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms