Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 COX6CP18-201ENST00000448769 222 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AC009220.1-201ENST00000451614 275 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 snoU13.3-201ENST00000459441 104 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 RPL35AP15-201ENST00000468042 339 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 RN7SL303P-201ENST00000469773 251 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 OR51K1P-201ENST00000510214 950 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 AGGF1P5-201ENST00000567900 919 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AC015688.2-201ENST00000584523 262 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AC069545.1-201ENST00000605671 358 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AC016877.3-201ENST00000606778 504 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AC103710.3-201ENST00000608157 948 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 AL158163.2-201ENST00000619110 700 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AC019278.1-201ENST00000623516 479 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AL512506.2-201ENST00000624472 458 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AC090506.2-201ENST00000624521 419 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 FP325313.1-201ENST00000638228 703 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4□□□□□ -1.77
NUP54Q7Z3B4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NUP54Q7Z3B4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NUP54Q7Z3B4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NUP54Q7Z3B4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 MTND4P10-201ENST00000446199 1363 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AP001350.1-201ENST00000601906 1524 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 RNU6-600P-201ENST00000362524 99 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 MIR649-201ENST00000384843 97 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 MIR141-201ENST00000384975 95 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 SNORD65.1-201ENST00000390889 71 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AL133264.1-201ENST00000407157 562 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AL592310.1-201ENST00000414330 671 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC007435.1-201ENST00000421086 415 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC016712.1-201ENST00000431088 378 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC004022.1-201ENST00000447766 1066 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 ABCF2P2-201ENST00000450549 296 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 SNORD11.1-201ENST00000459482 85 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 RPL23AP2-201ENST00000471227 466 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 VN1R17P-201ENST00000472048 1090 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 RPS4XP13-201ENST00000483219 789 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC084024.2-201ENST00000503480 791 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC020699.1-201ENST00000505161 445 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 BOLA3P3-201ENST00000505182 232 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 PPBPP1-201ENST00000510807 373 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 HIGD1AP5-201ENST00000529959 259 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC069240.1-201ENST00000548774 375 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 LSM6P2-201ENST00000552208 177 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 PSMB7P1-201ENST00000556349 514 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC093519.1-201ENST00000566109 298 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 CCDC58P3-201ENST00000590792 430 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AL450336.1-201ENST00000605180 586 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC024257.5-201ENST00000612739 531 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 AC090897.3-201ENST00000636973 1157 ntBASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.99□□□□□ -1.77
NUP54Q7Z3B4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 RNU6-1066P-201ENST00000363573 105 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AL161909.1-201ENST00000397390 712 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms