Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RN7SL442P-201ENST00000473804 320 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AC026801.2-201ENST00000515352 425 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 MIR4524B-201ENST00000581569 115 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 ELL2P4-201ENST00000446870 1376 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AC112492.1-201ENST00000449607 712 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 TRBV12-1-201ENST00000479785 344 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AP001025.2-201ENST00000490908 477 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 YWHAEP4-201ENST00000505390 198 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 HIGD1AP13-201ENST00000509878 289 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AC025754.2-201ENST00000606491 432 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 MRPS33P4-201ENST00000434892 317 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 HMGB3P6-201ENST00000444896 598 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AC113430.1-201ENST00000506872 718 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 ARL2BPP6-201ENST00000512757 439 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AC007619.2-201ENST00000605743 379 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AL590808.1-201ENST00000618696 141 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AC110754.1-201ENST00000399740 601 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 NPM1P11-201ENST00000417106 855 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 THAP12P8-201ENST00000447914 2115 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AC010401.1-201ENST00000463867 348 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AC104687.1-201ENST00000485829 412 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AC083906.5-201ENST00000503722 328 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AP003122.3-201ENST00000526316 255 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 AC009159.1-201ENST00000618386 642 ntBASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VPS13DQ5THJ4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
VPS13DQ5THJ4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
VPS13DQ5THJ4 SPATA2P1-201ENST00000431223 2055 ntBASIC1.96□□□□□ -2.09
VPS13DQ5THJ4 SMC4P1-201ENST00000414479 527 ntBASIC1.96□□□□□ -2.09
VPS13DQ5THJ4 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC1.96□□□□□ -2.09
VPS13DQ5THJ4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC1.96□□□□□ -2.09
VPS13DQ5THJ4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.96□□□□□ -2.09
VPS13DQ5THJ4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC1.96□□□□□ -2.09
VPS13DQ5THJ4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.96□□□□□ -2.09
VPS13DQ5THJ4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.96□□□□□ -2.09
VPS13DQ5THJ4 AC009097.3-201ENST00000563557 1018 ntBASIC1.96□□□□□ -2.09
VPS13DQ5THJ4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.96□□□□□ -2.09
VPS13DQ5THJ4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 AC104027.1-201ENST00000521887 300 ntBASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 RNU2-52P-201ENST00000410680 190 ntBASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 AC133473.1-201ENST00000455173 299 ntBASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 AL513328.1-201ENST00000446460 224 ntBASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 RPL23AP31-201ENST00000456160 467 ntBASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 snoU13.26-201ENST00000459452 105 ntBASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 RNA5SP367-201ENST00000516557 118 ntBASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 MIR6817-201ENST00000615588 66 ntBASIC1.96□□□□□ -2.1
VPS13DQ5THJ4 AL365361.1-201ENST00000566942 3481 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 OR5BR1P-201ENST00000524992 1330 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AC116096.1-201ENST00000566804 2314 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 MIR423-201ENST00000362201 94 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AL079342.1-201ENST00000401460 267 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 RN7SKP247-201ENST00000411094 308 ntBASIC1.95□□□□□ -2.1
VPS13DQ5THJ4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms