Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC240504.1-201ENST00000395709 845 ntBASIC2.6□□□□□ -1.99
HIST1H1AQ02539 RNA5SP344-201ENST00000411081 104 ntBASIC2.6□□□□□ -1.99
HIST1H1AQ02539 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 YWHAZP7-201ENST00000436906 631 ntBASIC2.6□□□□□ -1.99
HIST1H1AQ02539 ISCA1P2-201ENST00000438679 421 ntBASIC2.6□□□□□ -1.99
HIST1H1AQ02539 GAPDHP27-201ENST00000447427 1020 ntBASIC2.6□□□□□ -1.99
HIST1H1AQ02539 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AC068587.1-201ENST00000483613 781 ntBASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AF279873.1-201ENST00000523393 313 ntBASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 OR8L1P-201ENST00000534005 955 ntBASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AC090616.5-202ENST00000582111 297 ntBASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AL357559.1-201ENST00000622228 274 ntBASIC2.6□□□□□ -1.99
HIST1H1AQ02539 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AL356274.2-201ENST00000624379 3752 ntBASIC2.6□□□□□ -1.99
HIST1H1AQ02539 ELL2P4-201ENST00000446870 1376 ntBASIC2.6□□□□□ -1.99
HIST1H1AQ02539 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
HIST1H1AQ02539 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
HIST1H1AQ02539 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HIST1H1AQ02539 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HIST1H1AQ02539 U8.9-201ENST00000365667 134 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.59□□□□□ -1.99
HIST1H1AQ02539 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.59□□□□□ -1.99
HIST1H1AQ02539 RNU6-532P-201ENST00000384318 107 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 RN7SKP58-201ENST00000411010 305 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 RNU2-71P-201ENST00000411395 189 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 DBIP2-201ENST00000419076 262 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AC023347.2-201ENST00000433994 462 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AC008264.1-201ENST00000447612 367 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AC097262.1-201ENST00000452559 548 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AC007967.1-201ENST00000455422 1159 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 SNORD105B-201ENST00000458770 79 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 RPL21P18-201ENST00000469899 480 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AC068724.1-201ENST00000487100 792 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 RPL23AP55-201ENST00000498163 452 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AC108078.3-201ENST00000502633 489 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 PRELID3BP5-201ENST00000508612 460 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 SEC11B-201ENST00000518383 499 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AL157394.1-201ENST00000562983 1224 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AC010653.1-201ENST00000571108 881 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 MIR3160-1-201ENST00000577972 85 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AC078899.3-201ENST00000599065 212 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AC006557.5-201ENST00000603126 811 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 MIR7851-201ENST00000610611 160 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AL390240.1-201ENST00000612950 384 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 AC016717.3-201ENST00000624730 554 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.59□□□□□ -1.99
HIST1H1AQ02539 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.59□□□□□ -1.99
HIST1H1AQ02539 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HIST1H1AQ02539 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.59□□□□□ -2
HIST1H1AQ02539 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
HIST1H1AQ02539 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 AC032011.1-201ENST00000611703 1549 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 AC010733.2-201ENST00000589496 5702 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 AC093010.3-201ENST00000570269 15214 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HIST1H1AQ02539 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.58□□□□□ -2
HIST1H1AQ02539 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.58□□□□□ -2
HIST1H1AQ02539 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
HIST1H1AQ02539 RPL21P3-201ENST00000395517 478 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 RPL21P17-201ENST00000397467 475 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 EIF5P1-201ENST00000400019 1231 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.58□□□□□ -2
HIST1H1AQ02539 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.58□□□□□ -2
HIST1H1AQ02539 AL356968.1-201ENST00000416622 474 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.58□□□□□ -2
HIST1H1AQ02539 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.58□□□□□ -2
HIST1H1AQ02539 AC241520.1-201ENST00000422654 1099 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.58□□□□□ -2
HIST1H1AQ02539 AC091390.1-201ENST00000433904 331 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 VDAC1P3-201ENST00000434069 851 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.58□□□□□ -2
HIST1H1AQ02539 NOTCH2P1-201ENST00000443481 624 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 TPMTP4-201ENST00000450749 678 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.58□□□□□ -2
HIST1H1AQ02539 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.58□□□□□ -2
HIST1H1AQ02539 AC146507.2-201ENST00000460608 476 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 HMGN2P13-201ENST00000476476 274 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 ACTR3P3-201ENST00000480448 893 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 AC093278.1-201ENST00000494700 600 ntBASIC2.58□□□□□ -2
HIST1H1AQ02539 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms