Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.49□□□□□ -1.85
PKNOX1P55347 AC092451.1-201ENST00000480211 153 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 AC008885.2-201ENST00000509506 930 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.49□□□□□ -1.85
PKNOX1P55347 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.49□□□□□ -1.85
PKNOX1P55347 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.49□□□□□ -1.85
PKNOX1P55347 MTND2P26-201ENST00000528255 1029 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 PDCL2P2-201ENST00000533651 189 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.49□□□□□ -1.85
PKNOX1P55347 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.49□□□□□ -1.85
PKNOX1P55347 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.49□□□□□ -1.85
PKNOX1P55347 MIR3186-201ENST00000577404 85 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.49□□□□□ -1.85
PKNOX1P55347 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.49□□□□□ -1.85
PKNOX1P55347 ZYXP1-201ENST00000617638 118 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 AL357559.1-201ENST00000622228 274 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 AC092608.3-201ENST00000625017 386 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKNOX1P55347 AC017104.5-201ENST00000637647 639 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PKNOX1P55347 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKNOX1P55347 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
PKNOX1P55347 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKNOX1P55347 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.48□□□□□ -1.85
PKNOX1P55347 AF127577.6-201ENST00000623352 2191 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKNOX1P55347 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKNOX1P55347 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
PKNOX1P55347 RPL32P23-201ENST00000397237 405 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 SNORA11C-201ENST00000408532 129 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.48□□□□□ -1.85
PKNOX1P55347 NUP35P2-201ENST00000416748 943 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AC068533.1-201ENST00000418542 415 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.48□□□□□ -1.85
PKNOX1P55347 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.48□□□□□ -1.85
PKNOX1P55347 AL049610.1-201ENST00000423374 372 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 C4BPAP2-201ENST00000428434 478 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 OR4F13P-201ENST00000428478 931 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.48□□□□□ -1.85
PKNOX1P55347 MTND1P33-201ENST00000446251 917 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 RPL29P29-201ENST00000448725 423 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.48□□□□□ -1.85
PKNOX1P55347 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKNOX1P55347 AC009220.1-201ENST00000451614 275 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AC008280.2-201ENST00000455473 307 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AC010401.1-201ENST00000463867 348 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 SNRPGP3-201ENST00000469405 227 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AC023598.1-201ENST00000472521 361 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 RN7SL132P-201ENST00000478131 296 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AC015724.1-201ENST00000478577 156 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.48□□□□□ -1.85
PKNOX1P55347 RPL5P23-201ENST00000496040 868 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 UBE2CP3-201ENST00000502715 450 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 OR5H3P-201ENST00000502817 919 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.48□□□□□ -1.85
PKNOX1P55347 AC093853.1-201ENST00000515689 483 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 RANP9-201ENST00000519957 271 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.48□□□□□ -1.85
PKNOX1P55347 AP003049.1-201ENST00000529418 457 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.48□□□□□ -1.85
PKNOX1P55347 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.48□□□□□ -1.85
PKNOX1P55347 OR8R1P-201ENST00000543943 764 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 DUXAP6-201ENST00000553858 601 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.48□□□□□ -1.85
PKNOX1P55347 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.48□□□□□ -1.85
PKNOX1P55347 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.48□□□□□ -1.85
PKNOX1P55347 AC112503.1-201ENST00000608436 391 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.48□□□□□ -1.85
PKNOX1P55347 AC090912.3-201ENST00000609775 533 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AL359535.1-201ENST00000612100 1087 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AC083809.1-201ENST00000615051 472 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AC022149.2-201ENST00000621061 203 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 AC092628.2-201ENST00000622492 339 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 SAGE4P-201ENST00000442271 3381 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 XPOTP1-201ENST00000443317 2398 ntBASIC3.48□□□□□ -1.85
PKNOX1P55347 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKNOX1P55347 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKNOX1P55347 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PKNOX1P55347 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.47□□□□□ -1.85
PKNOX1P55347 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PKNOX1P55347 AP001148.1-201ENST00000624124 2359 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PKNOX1P55347 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKNOX1P55347 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PKNOX1P55347 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKNOX1P55347 OR4A15-201ENST00000314706 1035 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PKNOX1P55347 RNU6-609P-201ENST00000365459 107 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKNOX1P55347 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.47□□□□□ -1.85
PKNOX1P55347 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
PKNOX1P55347 MIR141-201ENST00000384975 95 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 DNAJC19P6-201ENST00000401853 280 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 RN7SKP156-201ENST00000410308 342 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 AC069218.2-201ENST00000411665 344 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.47□□□□□ -1.85
PKNOX1P55347 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.47□□□□□ -1.85
PKNOX1P55347 MTND4P22-201ENST00000413116 1169 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 AC007390.1-201ENST00000415722 356 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 LIPT1P1-201ENST00000415870 1186 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms