Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 NSRP1P1-201ENST00000444067 1693 ntBASIC3.68□□□□□ -1.82
CDH4P55283 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH4P55283 MTND5P3-201ENST00000438536 1800 ntBASIC3.67□□□□□ -1.82
CDH4P55283 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH4P55283 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH4P55283 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH4P55283 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH4P55283 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CDH4P55283 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH4P55283 AC016716.1-201ENST00000265882 708 ntBASIC3.67□□□□□ -1.82
CDH4P55283 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH4P55283 RNU1-18P-201ENST00000363062 164 ntBASIC3.67□□□□□ -1.82
CDH4P55283 RNU6-1005P-201ENST00000384519 107 ntBASIC3.67□□□□□ -1.82
CDH4P55283 MIR23B-201ENST00000384832 97 ntBASIC3.67□□□□□ -1.82
CDH4P55283 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH4P55283 BTBD10P2-201ENST00000404779 676 ntBASIC3.67□□□□□ -1.82
CDH4P55283 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH4P55283 AC092745.2-202ENST00000411880 369 ntBASIC3.67□□□□□ -1.82
CDH4P55283 RPS29P4-201ENST00000414733 161 ntBASIC3.67□□□□□ -1.82
CDH4P55283 AC006989.1-201ENST00000427212 131 ntBASIC3.67□□□□□ -1.82
CDH4P55283 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH4P55283 AL365396.1-201ENST00000430854 671 ntBASIC3.67□□□□□ -1.82
CDH4P55283 MRPS18BP2-201ENST00000434310 759 ntBASIC3.67□□□□□ -1.82
CDH4P55283 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH4P55283 RPL21P23-201ENST00000446654 460 ntBASIC3.67□□□□□ -1.82
CDH4P55283 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH4P55283 CFTRP1-201ENST00000456646 183 ntBASIC3.67□□□□□ -1.82
CDH4P55283 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.67□□□□□ -1.82
CDH4P55283 TMED11P-201ENST00000479478 690 ntBASIC3.67□□□□□ -1.82
CDH4P55283 AL049830.2-201ENST00000480072 201 ntBASIC3.67□□□□□ -1.82
CDH4P55283 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CDH4P55283 RPL23AP73-201ENST00000492507 471 ntBASIC3.67□□□□□ -1.82
CDH4P55283 AC078817.1-201ENST00000492623 435 ntBASIC3.67□□□□□ -1.82
CDH4P55283 RPL5P23-201ENST00000496040 868 ntBASIC3.67□□□□□ -1.82
CDH4P55283 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH4P55283 RN7SKP13-201ENST00000515933 244 ntBASIC3.67□□□□□ -1.82
CDH4P55283 NARSP2-201ENST00000518524 679 ntBASIC3.67□□□□□ -1.82
CDH4P55283 AC026616.1-201ENST00000523157 525 ntBASIC3.67□□□□□ -1.82
CDH4P55283 AC083923.1-201ENST00000523708 376 ntBASIC3.67□□□□□ -1.82
CDH4P55283 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH4P55283 AC008739.3-201ENST00000603262 127 ntBASIC3.67□□□□□ -1.82
CDH4P55283 AC012467.1-201ENST00000607740 256 ntBASIC3.67□□□□□ -1.82
CDH4P55283 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH4P55283 AC243312.2-201ENST00000623340 601 ntBASIC3.67□□□□□ -1.82
CDH4P55283 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH4P55283 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH4P55283 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH4P55283 MTCO1P18-201ENST00000455518 1419 ntBASIC3.67□□□□□ -1.82
CDH4P55283 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH4P55283 MTND5P11-201ENST00000511037 1812 ntBASIC3.67□□□□□ -1.82
CDH4P55283 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH4P55283 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CDH4P55283 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH4P55283 CEP170P1-201ENST00000502249 4587 ntBASIC3.66□□□□□ -1.82
CDH4P55283 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CDH4P55283 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH4P55283 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CDH4P55283 AL365440.1-201ENST00000436135 2167 ntBASIC3.66□□□□□ -1.82
CDH4P55283 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH4P55283 AC007656.2-201ENST00000624902 4547 ntBASIC3.66□□□□□ -1.82
CDH4P55283 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH4P55283 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH4P55283 MIR218-2-201ENST00000385006 110 ntBASIC3.66□□□□□ -1.82
CDH4P55283 MIR670-201ENST00000390142 98 ntBASIC3.66□□□□□ -1.82
CDH4P55283 U3.39-201ENST00000408569 239 ntBASIC3.66□□□□□ -1.82
CDH4P55283 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH4P55283 AC069157.1-201ENST00000421749 137 ntBASIC3.66□□□□□ -1.82
CDH4P55283 MORF4L1P7-201ENST00000426038 703 ntBASIC3.66□□□□□ -1.82
CDH4P55283 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH4P55283 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH4P55283 HMGN2P31-201ENST00000432430 273 ntBASIC3.66□□□□□ -1.82
CDH4P55283 SKP1P1-201ENST00000438081 489 ntBASIC3.66□□□□□ -1.82
CDH4P55283 UBE2V1P5-201ENST00000440070 405 ntBASIC3.66□□□□□ -1.82
CDH4P55283 AC092641.1-201ENST00000440229 772 ntBASIC3.66□□□□□ -1.82
CDH4P55283 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH4P55283 AC004865.1-201ENST00000442276 1003 ntBASIC3.66□□□□□ -1.82
CDH4P55283 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH4P55283 AC023598.1-201ENST00000472521 361 ntBASIC3.66□□□□□ -1.82
CDH4P55283 NPM1P17-201ENST00000479221 602 ntBASIC3.66□□□□□ -1.82
CDH4P55283 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH4P55283 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH4P55283 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH4P55283 AC110768.1-201ENST00000509222 400 ntBASIC3.66□□□□□ -1.82
CDH4P55283 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH4P55283 SNORA70.18-201ENST00000516696 98 ntBASIC3.66□□□□□ -1.82
CDH4P55283 SOD1P3-201ENST00000518682 454 ntBASIC3.66□□□□□ -1.82
CDH4P55283 OR8I1P-201ENST00000529291 931 ntBASIC3.66□□□□□ -1.82
CDH4P55283 AC103843.2-201ENST00000530523 682 ntBASIC3.66□□□□□ -1.82
CDH4P55283 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH4P55283 OR6C73P-201ENST00000546432 358 ntBASIC3.66□□□□□ -1.82
CDH4P55283 AC027104.1-201ENST00000563702 681 ntBASIC3.66□□□□□ -1.82
CDH4P55283 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH4P55283 YWHAQP7-201ENST00000603536 658 ntBASIC3.66□□□□□ -1.82
CDH4P55283 OR4H6P-202ENST00000603819 340 ntBASIC3.66□□□□□ -1.82
CDH4P55283 U3.45-201ENST00000607547 219 ntBASIC3.66□□□□□ -1.82
CDH4P55283 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.66□□□□□ -1.82
CDH4P55283 AC022079.2-201ENST00000619739 566 ntBASIC3.66□□□□□ -1.82
CDH4P55283 U7.8-201ENST00000619968 63 ntBASIC3.66□□□□□ -1.82
CDH4P55283 MIR6075-201ENST00000620782 95 ntBASIC3.66□□□□□ -1.82
CDH4P55283 AL118508.4-201ENST00000624142 1176 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms