Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 HSFY7P-201ENST00000432672 318 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 HSFY8P-201ENST00000437934 318 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 HSFY5P-201ENST00000453726 309 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 RPS15AP1-201ENST00000457423 391 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC005726.1-201ENST00000494679 427 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC025554.1-201ENST00000505641 188 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC104115.2-201ENST00000523026 687 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC022882.1-201ENST00000532142 501 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 MTCYBP28-201ENST00000566728 1132 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 RN7SL339P-201ENST00000580597 296 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC022069.1-201ENST00000582910 658 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC006116.7-201ENST00000590141 756 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC020914.6-201ENST00000594327 272 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC244505.7-201ENST00000599675 272 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 BNIP3P39-201ENST00000601077 554 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC083899.3-201ENST00000603413 594 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC024933.1-201ENST00000608472 348 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 VN1R74P-201ENST00000613259 503 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AL357559.1-201ENST00000622228 274 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AL138955.1-201ENST00000622881 1040 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC068620.4-201ENST00000636730 1182 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 AC244258.1-201ENST00000637553 1071 ntBASIC3.82□□□□□ -1.8
TNFRSF4P43489 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFRSF4P43489 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFRSF4P43489 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFRSF4P43489 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 MTND4P9-201ENST00000507819 1346 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 RNU6-444P-201ENST00000383988 108 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 RNU6-356P-201ENST00000384140 107 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC068533.1-201ENST00000418542 415 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 CYP4F29P-201ENST00000420685 446 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 RPL36P19-201ENST00000430744 301 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC010881.1-201ENST00000433830 235 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 CYCSP43-201ENST00000438233 310 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC006480.1-201ENST00000449887 378 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AL645939.1-201ENST00000453429 797 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 SNORD108-201ENST00000459332 71 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 RPL21P71-201ENST00000465598 459 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 RPL31P61-201ENST00000496160 376 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 HMGB3P13-201ENST00000511263 607 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC119751.1-201ENST00000513357 765 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AP003066.2-201ENST00000529375 555 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 OR5B10P-201ENST00000532869 642 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC006960.3-201ENST00000561845 705 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC008507.2-201ENST00000588402 1176 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 VN1R87P-201ENST00000596706 487 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC068620.3-201ENST00000602749 560 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC010591.1-201ENST00000603941 649 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC002487.1-201ENST00000604565 994 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC012468.1-201ENST00000604888 430 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC128687.2-201ENST00000609657 566 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AL049777.1-201ENST00000622740 518 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 U6.105-201ENST00000637379 88 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC139713.2-210ENST00000641741 992 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
TNFRSF4P43489 AC097504.1-201ENST00000515103 2415 ntBASIC3.81□□□□□ -1.8
TNFRSF4P43489 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFRSF4P43489 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms