Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AL500522.2-201ENST00000448562 343 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM23P36406 AC233982.1-201ENST00000451247 436 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 DNAJC19P8-201ENST00000452887 259 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 VN1R40P-201ENST00000455196 941 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 AC126121.1-201ENST00000482313 553 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM23P36406 RPL21P129-201ENST00000491732 478 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 RPL7P24-201ENST00000493052 752 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM23P36406 AC008885.2-201ENST00000509506 930 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 PRELID3BP4-201ENST00000515476 571 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.83□□□□□ -1.8
TRIM23P36406 AC093853.1-201ENST00000515689 483 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 SNORA67.7-201ENST00000516664 135 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 AC023632.4-201ENST00000517783 191 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.83□□□□□ -1.8
TRIM23P36406 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM23P36406 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM23P36406 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM23P36406 MIR3158-1-201ENST00000583596 81 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM23P36406 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM23P36406 AC091488.1-201ENST00000604239 660 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 AC112230.1-201ENST00000604342 547 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 Z82195.1-201ENST00000604558 398 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 AP000255.1-201ENST00000610276 676 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 AL359535.1-201ENST00000612100 1087 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 RNU6-156P-201ENST00000621869 107 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 AC039056.2-201ENST00000622261 511 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 AP003476.1-201ENST00000623984 516 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 AC006927.2-201ENST00000639256 389 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 AL122126.1-201ENST00000546905 1318 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM23P36406 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM23P36406 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM23P36406 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM23P36406 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TRIM23P36406 AL133383.2-201ENST00000622958 2336 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM23P36406 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM23P36406 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
TRIM23P36406 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM23P36406 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM23P36406 AP004289.2-201ENST00000444413 1457 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
TRIM23P36406 DCAF13P1-201ENST00000495256 1330 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM23P36406 OR4A15-201ENST00000314706 1035 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 RNU1-85P-201ENST00000364127 164 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 SNORA48.7-201ENST00000391302 135 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 MTHFD2P2-201ENST00000407725 247 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM23P36406 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM23P36406 SNORA57.3-201ENST00000411095 141 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM23P36406 RPS15AP40-201ENST00000419621 391 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM23P36406 Z74696.2-201ENST00000436514 498 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 RPL23AP15-201ENST00000450202 459 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 AC008280.2-201ENST00000455473 307 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 RN7SL330P-201ENST00000469709 307 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 RPL21P18-201ENST00000469899 480 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM23P36406 RNU2-58P-201ENST00000516403 183 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 RNA5SP164-201ENST00000516533 110 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 RNU1-45P-201ENST00000517191 141 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM23P36406 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM23P36406 AC010735.1-201ENST00000567305 1026 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM23P36406 AC087499.8-201ENST00000578406 226 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 RN7SL622P-201ENST00000585292 275 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM23P36406 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM23P36406 AC006254.3-201ENST00000603353 884 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 BNIP3P31-201ENST00000604515 566 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 BNIP3P4-201ENST00000604946 565 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM23P36406 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM23P36406 FAM157B-203ENST00000639350 358 ntBASIC3.82□□□□□ -1.8
TRIM23P36406 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM23P36406 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM23P36406 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
TRIM23P36406 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM23P36406 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM23P36406 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM23P36406 OTUD4P1-201ENST00000237841 3067 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRIM23P36406 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM23P36406 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
TRIM23P36406 SNORA70E-201ENST00000384492 135 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AL590704.1-201ENST00000402856 794 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM23P36406 AC092647.1-201ENST00000420654 287 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AL049610.1-201ENST00000423374 372 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AL591419.1-201ENST00000427423 339 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AC018644.1-201ENST00000429934 551 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AL035246.1-201ENST00000433554 1255 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 SDR42E1P3-201ENST00000438345 502 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms