Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HOXD13P35453 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXD13P35453 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXD13P35453 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD13P35453 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HOXD13P35453 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HOXD13P35453 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HOXD13P35453 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
HOXD13P35453 RN7SKP44-201ENST00000363602 316 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 RNU1-13P-201ENST00000384499 162 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 SNORA70C-201ENST00000384538 135 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 MTCO2P8-201ENST00000412213 658 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 AC004022.1-201ENST00000447766 1066 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 MTCO1P48-201ENST00000448024 1096 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXD13P35453 RPL5P32-201ENST00000454085 879 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 AC013828.1-201ENST00000481845 158 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD13P35453 AC113420.1-201ENST00000507903 571 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD13P35453 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXD13P35453 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD13P35453 OR4A12P-201ENST00000530847 918 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD13P35453 GTF2IP8-201ENST00000560687 584 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 SULT1C2P1-202ENST00000562418 459 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD13P35453 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXD13P35453 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.4□□□□□ -1.71
HOXD13P35453 AL451044.1-201ENST00000604867 238 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.4□□□□□ -1.71
HOXD13P35453 AL159169.3-201ENST00000608871 561 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 AC024257.5-201ENST00000612739 531 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD13P35453 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXD13P35453 OR4G3P-201ENST00000633500 913 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
HOXD13P35453 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD13P35453 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HOXD13P35453 FAM91A3P-201ENST00000456826 2544 ntBASIC4.4□□□□□ -1.71
HOXD13P35453 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD13P35453 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD13P35453 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD13P35453 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD13P35453 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD13P35453 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD13P35453 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD13P35453 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD13P35453 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD13P35453 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXD13P35453 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXD13P35453 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD13P35453 MIR372-201ENST00000362225 67 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 SNORA60-201ENST00000362396 134 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 SNORA72.3-201ENST00000365074 132 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 AL049693.1-201ENST00000402760 611 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 RNA5SP39-201ENST00000411245 120 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.39□□□□□ -1.71
HOXD13P35453 MRPS36P1-201ENST00000421291 307 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 COX6CP17-201ENST00000421389 185 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 SDCBPP2-201ENST00000424643 885 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 OR5BE1P-201ENST00000425977 939 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 USP9YP24-201ENST00000434374 697 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXD13P35453 AC083863.1-201ENST00000438811 231 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 AL353748.1-201ENST00000440753 474 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 TPTE2P3-201ENST00000441562 1189 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 USP9YP17-201ENST00000444617 696 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXD13P35453 HMGB3P30-201ENST00000457863 606 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXD13P35453 AC108734.3-201ENST00000481241 1165 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXD13P35453 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXD13P35453 AC108064.1-201ENST00000513791 460 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXD13P35453 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXD13P35453 AC087808.1-201ENST00000520501 361 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXD13P35453 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXD13P35453 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD13P35453 MTND3P13-201ENST00000574391 343 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXD13P35453 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXD13P35453 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD13P35453 VN1R83P-201ENST00000595685 445 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 AC005332.6-201ENST00000613178 446 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXD13P35453 OR5BE1P-202ENST00000641168 1176 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 LINC02211-204ENST00000642024 1070 ntBASIC4.39□□□□□ -1.71
HOXD13P35453 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD13P35453 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXD13P35453 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXD13P35453 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD13P35453 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXD13P35453 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.38□□□□□ -1.71
HOXD13P35453 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD13P35453 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms