Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC234064.1-201ENST00000436312 247 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC8P31273 AC133473.1-201ENST00000455173 299 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC8P31273 NAP1L1P3-201ENST00000462291 880 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC8P31273 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC8P31273 UBE2CP3-201ENST00000502715 450 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXC8P31273 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC8P31273 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC8P31273 AC119751.1-201ENST00000513357 765 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 RNU6-202P-201ENST00000515998 96 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 RN7SKP287-201ENST00000516546 266 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 IGLV3-26-201ENST00000520756 302 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC8P31273 OR8K4P-201ENST00000534608 872 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC8P31273 AC008687.2-201ENST00000597865 520 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC8P31273 AC104662.1-201ENST00000604448 511 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 Z82195.1-201ENST00000604558 398 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 AC093424.1-201ENST00000604999 338 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 AC113194.1-201ENST00000606037 500 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 AC069200.1-201ENST00000609511 323 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 AC005344.1-201ENST00000613391 459 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 AC026368.1-201ENST00000614934 690 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 AC067931.1-201ENST00000624190 671 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC8P31273 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC8P31273 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC8P31273 AC126323.6-202ENST00000568092 3511 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.33□□□□□ -1.72
HOXC8P31273 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC8P31273 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC8P31273 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC8P31273 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC8P31273 AP004289.2-201ENST00000444413 1457 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC8P31273 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC8P31273 RNU5B-1-201ENST00000363286 116 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HOXC8P31273 RPL21P17-201ENST00000397467 475 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HOXC8P31273 TAF13P2-201ENST00000416876 286 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 PAICSP7-201ENST00000419829 962 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC8P31273 AL591419.1-201ENST00000427423 339 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 MTND2P5-201ENST00000432656 1006 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 Z74696.2-201ENST00000436514 498 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 MTND1P31-201ENST00000449206 961 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC8P31273 HMGN3P1-201ENST00000453847 193 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC8P31273 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC8P31273 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC8P31273 PPIAP15-201ENST00000479662 484 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC8P31273 AC012170.1-201ENST00000495139 359 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC8P31273 RNU6-416P-201ENST00000516265 103 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC8P31273 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC8P31273 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC8P31273 AC135001.1-201ENST00000544546 283 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC8P31273 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC8P31273 GTF2IP22-201ENST00000554443 182 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC8P31273 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC8P31273 AP001542.2-201ENST00000593141 364 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 AC234772.3-201ENST00000602277 528 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 AC073387.2-201ENST00000604797 784 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC8P31273 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC8P31273 AL356121.2-201ENST00000624715 780 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 AC009093.8-201ENST00000641769 292 ntBASIC4.32□□□□□ -1.72
HOXC8P31273 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
HOXC8P31273 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC8P31273 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC8P31273 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC8P31273 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
HOXC8P31273 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC8P31273 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC8P31273 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
HOXC8P31273 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXC8P31273 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC8P31273 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC8P31273 SGO1P1-201ENST00000603525 1447 ntBASIC4.31□□□□□ -1.72
HOXC8P31273 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC8P31273 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HOXC8P31273 MTND4P8-201ENST00000514997 1362 ntBASIC4.31□□□□□ -1.72
HOXC8P31273 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
HOXC8P31273 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC8P31273 RNA5SP97-201ENST00000365006 84 ntBASIC4.31□□□□□ -1.72
HOXC8P31273 SNORA70E-201ENST00000384492 135 ntBASIC4.31□□□□□ -1.72
HOXC8P31273 RPL7P27-201ENST00000403775 720 ntBASIC4.31□□□□□ -1.72
HOXC8P31273 SNORA3C-201ENST00000408792 125 ntBASIC4.31□□□□□ -1.72
HOXC8P31273 MTATP6P20-201ENST00000414147 562 ntBASIC4.31□□□□□ -1.72
HOXC8P31273 CRYBB2P1-203ENST00000415709 538 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms